Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 AC154184.3-201ENSMUST00000225620 1090 ntBASIC10.05□□□□□ -0.8
Nup43P59235 AC154407.1-201ENSMUST00000226777 526 ntBASIC10.05□□□□□ -0.8
Nup43P59235 Gm4604-201ENSMUST00000025040 390 ntBASIC10.05□□□□□ -0.8
Nup43P59235 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup43P59235 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup43P59235 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Nup43P59235 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nup43P59235 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nup43P59235 Gm7742-201ENSMUST00000167648 1527 ntBASIC10.05□□□□□ -0.8
Nup43P59235 Gm7732-201ENSMUST00000170486 1527 ntBASIC10.05□□□□□ -0.8
Nup43P59235 Gm7740-201ENSMUST00000186171 1527 ntBASIC10.05□□□□□ -0.8
Nup43P59235 Gm7736-201ENSMUST00000096981 1527 ntBASIC10.05□□□□□ -0.8
Nup43P59235 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup43P59235 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Nup43P59235 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nup43P59235 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup43P59235 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.05□□□□□ -0.8
Nup43P59235 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Nup43P59235 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Nup43P59235 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup43P59235 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Nup43P59235 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup43P59235 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Nup43P59235 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup43P59235 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.05□□□□□ -0.8
Nup43P59235 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup43P59235 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Nup43P59235 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Nup43P59235 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.04□□□□□ -0.8
Nup43P59235 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.04□□□□□ -0.8
Nup43P59235 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC10.04□□□□□ -0.8
Nup43P59235 Gm11980-201ENSMUST00000121445 986 ntBASIC10.04□□□□□ -0.8
Nup43P59235 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.04□□□□□ -0.8
Nup43P59235 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Gm22146-201ENSMUST00000157397 288 ntBASIC10.04□□□□□ -0.8
Nup43P59235 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 n-R5s130-201ENSMUST00000178128 119 ntBASIC10.04□□□□□ -0.8
Nup43P59235 Gm24312-201ENSMUST00000178677 119 ntBASIC10.04□□□□□ -0.8
Nup43P59235 n-R5s106-201ENSMUST00000179060 119 ntBASIC10.04□□□□□ -0.8
Nup43P59235 n-R5s118-201ENSMUST00000179887 119 ntBASIC10.04□□□□□ -0.8
Nup43P59235 Gm3671-201ENSMUST00000182463 1007 ntBASIC10.04□□□□□ -0.8
Nup43P59235 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC10.04□□□□□ -0.8
Nup43P59235 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC10.04□□□□□ -0.8
Nup43P59235 Mir6958-201ENSMUST00000184207 73 ntBASIC10.04□□□□□ -0.8
Nup43P59235 Gm8918-201ENSMUST00000190587 1087 ntBASIC10.04□□□□□ -0.8
Nup43P59235 Gm42780-201ENSMUST00000197083 734 ntBASIC10.04□□□□□ -0.8
Nup43P59235 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Gm31941-201ENSMUST00000209689 350 ntBASIC10.04□□□□□ -0.8
Nup43P59235 Gm7319-201ENSMUST00000210047 778 ntBASIC10.04□□□□□ -0.8
Nup43P59235 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.04□□□□□ -0.8
Nup43P59235 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Nup43P59235 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.04□□□□□ -0.8
Nup43P59235 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.04□□□□□ -0.8
Nup43P59235 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.04□□□□□ -0.8
Nup43P59235 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
Nup43P59235 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.04□□□□□ -0.8
Nup43P59235 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.04□□□□□ -0.8
Nup43P59235 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup43P59235 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Nup43P59235 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC10.03□□□□□ -0.8
Nup43P59235 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup43P59235 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup43P59235 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup43P59235 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup43P59235 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup43P59235 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup43P59235 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Nup43P59235 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup43P59235 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup43P59235 Gm45719-201ENSMUST00000207954 1662 ntBASIC10.03□□□□□ -0.8
Nup43P59235 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nup43P59235 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.03□□□□□ -0.8
Nup43P59235 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup43P59235 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup43P59235 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.03□□□□□ -0.8
Nup43P59235 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nup43P59235 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms