Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Atxn1P54254 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.61□□□□□ -0.71
Atxn1P54254 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.61□□□□□ -0.71
Atxn1P54254 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Atxn1P54254 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Gm44745-201ENSMUST00000206563 2723 ntBASIC10.61□□□□□ -0.71
Atxn1P54254 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Atxn1P54254 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Atxn1P54254 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Atxn1P54254 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Atxn1P54254 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Gm7061-201ENSMUST00000118127 1416 ntBASIC10.6□□□□□ -0.71
Atxn1P54254 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC10.6□□□□□ -0.71
Atxn1P54254 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.6□□□□□ -0.71
Atxn1P54254 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.6□□□□□ -0.71
Atxn1P54254 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.6□□□□□ -0.71
Atxn1P54254 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC10.6□□□□□ -0.71
Atxn1P54254 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC10.6□□□□□ -0.71
Atxn1P54254 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC10.6□□□□□ -0.71
Atxn1P54254 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.6□□□□□ -0.71
Atxn1P54254 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.6□□□□□ -0.71
Atxn1P54254 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Gm21631-201ENSMUST00000195041 754 ntBASIC10.6□□□□□ -0.71
Atxn1P54254 Gm3527-201ENSMUST00000198905 460 ntBASIC10.6□□□□□ -0.71
Atxn1P54254 Gm44008-201ENSMUST00000204345 412 ntBASIC10.6□□□□□ -0.71
Atxn1P54254 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC10.6□□□□□ -0.71
Atxn1P54254 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC10.6□□□□□ -0.71
Atxn1P54254 Gm5194-201ENSMUST00000221457 742 ntBASIC10.6□□□□□ -0.71
Atxn1P54254 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC10.6□□□□□ -0.71
Atxn1P54254 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.6□□□□□ -0.71
Atxn1P54254 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Atxn1P54254 Gm5424-201ENSMUST00000053865 1240 ntBASIC10.6□□□□□ -0.71
Atxn1P54254 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Gm10238-201ENSMUST00000089689 408 ntBASIC10.6□□□□□ -0.71
Atxn1P54254 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Atxn1P54254 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.6□□□□□ -0.71
Atxn1P54254 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Atxn1P54254 Gm29101-201ENSMUST00000188329 1471 ntBASIC10.6□□□□□ -0.71
Atxn1P54254 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.6□□□□□ -0.71
Atxn1P54254 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.6□□□□□ -0.71
Atxn1P54254 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.6□□□□□ -0.71
Atxn1P54254 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Atxn1P54254 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Atxn1P54254 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Atxn1P54254 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Atxn1P54254 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.59□□□□□ -0.71
Atxn1P54254 Gm12435-201ENSMUST00000118949 1016 ntBASIC10.59□□□□□ -0.71
Atxn1P54254 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC10.59□□□□□ -0.71
Atxn1P54254 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC10.59□□□□□ -0.71
Atxn1P54254 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Atxn1P54254 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC10.59□□□□□ -0.71
Atxn1P54254 Gm17799-201ENSMUST00000183270 667 ntBASIC10.59□□□□□ -0.71
Atxn1P54254 Mir6934-201ENSMUST00000183965 62 ntBASIC10.59□□□□□ -0.71
Atxn1P54254 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC10.59□□□□□ -0.71
Atxn1P54254 Mir8111-201ENSMUST00000184463 137 ntBASIC10.59□□□□□ -0.71
Atxn1P54254 Gm8828-201ENSMUST00000196786 1290 ntBASIC10.59□□□□□ -0.71
Atxn1P54254 Gm44540-201ENSMUST00000205640 354 ntBASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms