Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC8.84□□□□□ -0.99
Col8a2P25318 AC164099.1-201ENSMUST00000227780 333 ntBASIC8.84□□□□□ -0.99
Col8a2P25318 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Gm45719-201ENSMUST00000207954 1662 ntBASIC8.84□□□□□ -0.99
Col8a2P25318 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 AC154197.1-201ENSMUST00000225136 1382 ntBASIC8.84□□□□□ -0.99
Col8a2P25318 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Col8a2P25318 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Col8a2P25318 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Col8a2P25318 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC8.84□□□□□ -1
Col8a2P25318 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
Col8a2P25318 AC154640.1-203ENSMUST00000228316 1618 ntBASIC8.83□□□□□ -1
Col8a2P25318 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Col8a2P25318 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC8.83□□□□□ -1
Col8a2P25318 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Col8a2P25318 Gm37036-201ENSMUST00000192836 2506 ntBASIC8.83□□□□□ -1
Col8a2P25318 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC8.83□□□□□ -1
Col8a2P25318 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 AC159195.3-201ENSMUST00000225162 2211 ntBASIC8.83□□□□□ -1
Col8a2P25318 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC8.83□□□□□ -1
Col8a2P25318 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Gm13047-201ENSMUST00000117116 815 ntBASIC8.83□□□□□ -1
Col8a2P25318 Gm11235-201ENSMUST00000117763 333 ntBASIC8.83□□□□□ -1
Col8a2P25318 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC8.83□□□□□ -1
Col8a2P25318 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC8.83□□□□□ -1
Col8a2P25318 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Cd9-ps-201ENSMUST00000174687 650 ntBASIC8.83□□□□□ -1
Col8a2P25318 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC8.83□□□□□ -1
Col8a2P25318 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC8.83□□□□□ -1
Col8a2P25318 Gm43244-201ENSMUST00000196994 1285 ntBASIC8.83□□□□□ -1
Col8a2P25318 Gm8234-201ENSMUST00000198523 1107 ntBASIC8.83□□□□□ -1
Col8a2P25318 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC8.83□□□□□ -1
Col8a2P25318 Gm9515-201ENSMUST00000200276 647 ntBASIC8.83□□□□□ -1
Col8a2P25318 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Gm18123-201ENSMUST00000210874 822 ntBASIC8.83□□□□□ -1
Col8a2P25318 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Gm18122-201ENSMUST00000211390 904 ntBASIC8.83□□□□□ -1
Col8a2P25318 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC8.83□□□□□ -1
Col8a2P25318 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC8.83□□□□□ -1
Col8a2P25318 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Gm12716-201ENSMUST00000120606 1354 ntBASIC8.83□□□□□ -1
Col8a2P25318 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Col8a2P25318 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Col8a2P25318 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC8.83□□□□□ -1
Col8a2P25318 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Col8a2P25318 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC8.83□□□□□ -1
Col8a2P25318 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col8a2P25318 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Gm9466-201ENSMUST00000218144 2246 ntBASIC8.82□□□□□ -1
Col8a2P25318 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC8.82□□□□□ -1
Col8a2P25318 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Col8a2P25318 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Gm38034-201ENSMUST00000193915 2069 ntBASIC8.82□□□□□ -1
Col8a2P25318 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Col8a2P25318 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col8a2P25318 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms