Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm10580-201ENSMUST00000097985 396 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Gm10582-201ENSMUST00000097987 396 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Gm10583-201ENSMUST00000097988 396 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.25□□□□□ -0.61
Itgb3O54890 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Itgb3O54890 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Itgb3O54890 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Spata33-207ENSMUST00000212760 4074 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Gm12716-201ENSMUST00000120606 1354 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Itgb3O54890 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC11.25□□□□□ -0.61
Itgb3O54890 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Itgb3O54890 Gm42587-201ENSMUST00000198462 1981 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Itgb3O54890 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC11.24□□□□□ -0.61
Itgb3O54890 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.24□□□□□ -0.61
Itgb3O54890 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Mir291b-201ENSMUST00000104838 79 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 Gm8482-201ENSMUST00000117972 471 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 Gm13841-201ENSMUST00000118829 483 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 Gm11449-201ENSMUST00000119175 476 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 Gm13688-201ENSMUST00000121557 608 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.24□□□□□ -0.61
Itgb3O54890 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC11.24□□□□□ -0.61
Itgb3O54890 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Itgb3O54890 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Gm8210-201ENSMUST00000178557 483 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 Gm15454-201ENSMUST00000179718 483 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Gm37782-201ENSMUST00000194879 678 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC11.24□□□□□ -0.61
Itgb3O54890 Gm43778-201ENSMUST00000199438 199 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 Gm19566-201ENSMUST00000199576 610 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 Gm44304-201ENSMUST00000200509 145 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 Gm43811-201ENSMUST00000202862 695 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.24□□□□□ -0.61
Itgb3O54890 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.24□□□□□ -0.61
Itgb3O54890 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC11.24□□□□□ -0.61
Itgb3O54890 Thoc7-209ENSMUST00000225325 765 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Itgb3O54890 Gm6344-201ENSMUST00000075962 483 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Itgb3O54890 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Itgb3O54890 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Itgb3O54890 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Itgb3O54890 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC11.24□□□□□ -0.61
Itgb3O54890 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.24□□□□□ -0.61
Itgb3O54890 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Itgb3O54890 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Itgb3O54890 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Itgb3O54890 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Itgb3O54890 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Itgb3O54890 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Itgb3O54890 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Itgb3O54890 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms