Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc180J3QNE4 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc180J3QNE4 Gm32540-201ENSMUST00000207174 1872 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccdc180J3QNE4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc180J3QNE4 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc180J3QNE4 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccdc180J3QNE4 Gm26810-201ENSMUST00000181153 1106 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc180J3QNE4 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc180J3QNE4 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Ccdc180J3QNE4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc180J3QNE4 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc180J3QNE4 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc180J3QNE4 Gm11231-201ENSMUST00000117895 1706 ntBASIC19.06■□□□□ 0.64
Ccdc180J3QNE4 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm38309-201ENSMUST00000192063 1518 ntBASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm38140-201ENSMUST00000193617 2755 ntBASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Wdr20rt-202ENSMUST00000221658 1570 ntTSL 5 BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm15602-201ENSMUST00000116162 465 ntBASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm13215-201ENSMUST00000117559 472 ntBASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm15032-201ENSMUST00000118547 411 ntBASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 4930500F04Rik-203ENSMUST00000202177 576 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm44131-201ENSMUST00000203036 394 ntBASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm6684-201ENSMUST00000053717 685 ntBASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Ilf3-203ENSMUST00000213518 3513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm24471-201ENSMUST00000104485 131 ntBASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm4996-201ENSMUST00000122042 784 ntBASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 A930033M14Rik-201ENSMUST00000217206 400 ntBASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc180J3QNE4 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm2492-201ENSMUST00000221355 1394 ntBASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Lnpk-201ENSMUST00000064503 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm14654-201ENSMUST00000118620 447 ntBASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20924-201ENSMUST00000177663 684 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20816-201ENSMUST00000177765 684 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20909-201ENSMUST00000178234 684 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20825-202ENSMUST00000178396 684 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20852-201ENSMUST00000178761 684 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20867-201ENSMUST00000178900 684 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm21443-201ENSMUST00000179070 696 ntBASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20747-201ENSMUST00000179137 684 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm21394-201ENSMUST00000179523 684 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm21783-201ENSMUST00000179570 684 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm21812-201ENSMUST00000179590 684 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm21721-201ENSMUST00000179595 684 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20809-201ENSMUST00000179663 684 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm21118-201ENSMUST00000180179 684 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20806-201ENSMUST00000180324 684 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20909-202ENSMUST00000181205 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20907-201ENSMUST00000185201 693 ntBASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20919-201ENSMUST00000185282 696 ntBASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm21785-201ENSMUST00000185440 696 ntBASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm21808-201ENSMUST00000185495 696 ntBASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20898-201ENSMUST00000185598 693 ntBASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20800-201ENSMUST00000185634 693 ntBASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20902-201ENSMUST00000185643 696 ntBASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm21268-201ENSMUST00000185646 696 ntBASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm21257-201ENSMUST00000185655 696 ntBASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm21733-201ENSMUST00000185670 696 ntBASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm29075-201ENSMUST00000185717 696 ntBASIC19.04■□□□□ 0.64
Ccdc180J3QNE4 Gm20889-201ENSMUST00000185749 696 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms