Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm23119-201ENSMUST00000158610 140 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm20452-201ENSMUST00000174686 513 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm26587-201ENSMUST00000180795 989 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm9038-201ENSMUST00000203400 604 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm18042-201ENSMUST00000219887 790 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 AC102847.1-202ENSMUST00000226313 1245 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Gm4450-201ENSMUST00000167753 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Gm43528-201ENSMUST00000199492 1674 ntBASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Sntg1-202ENSMUST00000115488 1554 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Gm37389-201ENSMUST00000194885 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 AC154841.1-201ENSMUST00000227263 1479 ntBASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Gm13426-201ENSMUST00000117887 795 ntBASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Gm14793-201ENSMUST00000118739 311 ntBASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Gm25052-201ENSMUST00000122661 158 ntBASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Mir3473c-201ENSMUST00000175262 81 ntBASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Gm38181-201ENSMUST00000181357 720 ntBASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Gm27796-201ENSMUST00000183863 261 ntBASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Gm21877-201ENSMUST00000185640 694 ntBASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Itpa-ps2-201ENSMUST00000188629 589 ntBASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Gm38151-201ENSMUST00000195085 289 ntBASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Gm32916-201ENSMUST00000207884 935 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Gm8255-201ENSMUST00000218693 305 ntBASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Vmn1r193-201ENSMUST00000057516 960 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-1G3UXB3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms