Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.92□□□□□ -0.66
Atf6F6VAN0 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC10.92□□□□□ -0.66
Atf6F6VAN0 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Gm17221-201ENSMUST00000163909 481 ntBASIC10.92□□□□□ -0.66
Atf6F6VAN0 Gm17073-201ENSMUST00000168069 556 ntBASIC10.92□□□□□ -0.66
Atf6F6VAN0 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.92□□□□□ -0.66
Atf6F6VAN0 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.92□□□□□ -0.66
Atf6F6VAN0 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Mir7035-201ENSMUST00000184713 82 ntBASIC10.92□□□□□ -0.66
Atf6F6VAN0 Gm18776-201ENSMUST00000188833 654 ntBASIC10.92□□□□□ -0.66
Atf6F6VAN0 Gm34023-201ENSMUST00000195539 217 ntBASIC10.92□□□□□ -0.66
Atf6F6VAN0 Gm42518-201ENSMUST00000196277 938 ntBASIC10.92□□□□□ -0.66
Atf6F6VAN0 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Gm42710-201ENSMUST00000200608 985 ntBASIC10.92□□□□□ -0.66
Atf6F6VAN0 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.92□□□□□ -0.66
Atf6F6VAN0 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10.92□□□□□ -0.66
Atf6F6VAN0 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Gm16380-201ENSMUST00000077997 478 ntBASIC10.92□□□□□ -0.66
Atf6F6VAN0 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC10.92□□□□□ -0.66
Atf6F6VAN0 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Gm5697-201ENSMUST00000122295 2482 ntBASIC10.92□□□□□ -0.66
Atf6F6VAN0 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Atf6F6VAN0 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm37447-201ENSMUST00000195625 2928 ntBASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm42587-201ENSMUST00000198462 1981 ntBASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm12467-201ENSMUST00000117625 745 ntBASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.91□□□□□ -0.66
Atf6F6VAN0 Mir1905-201ENSMUST00000122779 82 ntBASIC10.91□□□□□ -0.66
Atf6F6VAN0 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm7719-201ENSMUST00000182374 975 ntBASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm18014-201ENSMUST00000183369 817 ntBASIC10.91□□□□□ -0.66
Atf6F6VAN0 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm28833-201ENSMUST00000189671 559 ntBASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm8918-201ENSMUST00000190587 1087 ntBASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm29107-201ENSMUST00000190910 347 ntBASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm38188-201ENSMUST00000192879 856 ntBASIC10.91□□□□□ -0.66
Atf6F6VAN0 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm5881-201ENSMUST00000204737 367 ntBASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm45310-201ENSMUST00000210436 275 ntBASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.91□□□□□ -0.66
Atf6F6VAN0 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.91□□□□□ -0.66
Atf6F6VAN0 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.91□□□□□ -0.66
Atf6F6VAN0 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Atf6F6VAN0 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms