Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 n-R5s185-201ENSMUST00000083953 119 ntBASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Trpm5-201ENSMUST00000009390 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 AC108416.1-201ENSMUST00000228755 1558 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm7405-201ENSMUST00000121476 1337 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm21142-201ENSMUST00000179999 2604 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm13668-201ENSMUST00000119237 1001 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm12274-201ENSMUST00000120062 385 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Mir1893-201ENSMUST00000122565 83 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm28324-201ENSMUST00000187913 264 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm42655-201ENSMUST00000202782 1134 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm3726-201ENSMUST00000203110 785 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm3619-201ENSMUST00000219947 775 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Gm18968-201ENSMUST00000221319 862 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 AC153152.3-201ENSMUST00000222188 1135 ntBASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61a2Q9JLR1 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61a2Q9JLR1 Gm6714-201ENSMUST00000218677 2330 ntBASIC9.57□□□□□ -0.88
Sec61a2Q9JLR1 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.57□□□□□ -0.88
Sec61a2Q9JLR1 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61a2Q9JLR1 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Sec61a2Q9JLR1 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61a2Q9JLR1 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61a2Q9JLR1 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61a2Q9JLR1 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61a2Q9JLR1 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Sec61a2Q9JLR1 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61a2Q9JLR1 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61a2Q9JLR1 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC9.57□□□□□ -0.88
Sec61a2Q9JLR1 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61a2Q9JLR1 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61a2Q9JLR1 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61a2Q9JLR1 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms