Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm22662-201ENSMUST00000175290 256 ntBASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Mir6396-201ENSMUST00000183603 111 ntBASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Mir7088-201ENSMUST00000184227 86 ntBASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 AC159006.3-201ENSMUST00000226918 664 ntBASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 AC163646.3-202ENSMUST00000228685 691 ntBASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Gm22751-201ENSMUST00000102077 109 ntBASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Mir692-3-201ENSMUST00000102079 109 ntBASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Mir692-2-201ENSMUST00000102081 109 ntBASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Gm14592-201ENSMUST00000117201 560 ntBASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Gm14633-201ENSMUST00000121152 470 ntBASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Gm12950-201ENSMUST00000121683 417 ntBASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Gm8268-201ENSMUST00000209683 458 ntBASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Gm2716-201ENSMUST00000212350 643 ntBASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Klf10-203ENSMUST00000227920 2144 ntBASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Gm8618-201ENSMUST00000097570 432 ntBASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx6-1Q99MA9 Gm15599-201ENSMUST00000122283 1345 ntBASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms