Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Gm28391-201ENSMUST00000185202 379 ntBASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Gm29528-201ENSMUST00000186699 379 ntBASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Gm29526-201ENSMUST00000187217 379 ntBASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 AC165260.2-201ENSMUST00000225371 395 ntBASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 AC174647.1-201ENSMUST00000227419 1271 ntBASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smarcd2Q99JR8 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Mir598-201ENSMUST00000102094 79 ntBASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Mir7088-201ENSMUST00000184227 86 ntBASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Gm44236-201ENSMUST00000204492 513 ntBASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Gm45090-201ENSMUST00000208775 1148 ntBASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Gm3889-201ENSMUST00000212467 612 ntBASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smarcd2Q99JR8 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms