Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Gm22146-201ENSMUST00000157397 288 ntBASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Gm19587-201ENSMUST00000191395 545 ntBASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Gm18059-201ENSMUST00000208073 580 ntBASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 AC154184.3-201ENSMUST00000225620 1090 ntBASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga4Q91XY4 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Gm24791-201ENSMUST00000104284 131 ntBASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Gm14592-201ENSMUST00000117201 560 ntBASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 AC154435.1-201ENSMUST00000223938 959 ntBASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Gm26670-202ENSMUST00000226862 340 ntBASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Pcdhga4Q91XY4 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Gm26976-201ENSMUST00000182929 908 ntBASIC10.5□□□□□ -0.73
Pcdhga4Q91XY4 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms