Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm5451-201ENSMUST00000080545 579 ntBASIC10.47□□□□□ -0.73
Ccdc28bQ8CEG5 Gm23105-201ENSMUST00000083719 134 ntBASIC10.47□□□□□ -0.73
Ccdc28bQ8CEG5 Pkp1-203ENSMUST00000163260 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc28bQ8CEG5 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC10.47□□□□□ -0.73
Ccdc28bQ8CEG5 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc28bQ8CEG5 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc28bQ8CEG5 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc28bQ8CEG5 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc28bQ8CEG5 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc28bQ8CEG5 Gm13128-201ENSMUST00000105751 1745 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Ccdc28bQ8CEG5 Btnl5-ps-201ENSMUST00000097346 1751 ntBASIC10.47□□□□□ -0.73
Ccdc28bQ8CEG5 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC10.47□□□□□ -0.73
Ccdc28bQ8CEG5 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccdc28bQ8CEG5 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Ccdc28bQ8CEG5 Gm43318-201ENSMUST00000199939 1949 ntBASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Ankmy1-202ENSMUST00000160548 3246 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Gm46218-202ENSMUST00000215520 1956 ntBASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Tgm7-201ENSMUST00000110675 2151 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Nolc1-209ENSMUST00000225780 2978 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Lrtm1-203ENSMUST00000224760 3060 ntBASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Plekho2-201ENSMUST00000068944 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Gm15554-201ENSMUST00000120406 913 ntBASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Gm27552-201ENSMUST00000183351 62 ntBASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Gm27844-201ENSMUST00000183613 62 ntBASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Gm5369-201ENSMUST00000217499 588 ntBASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC10.46□□□□□ -0.73
Ccdc28bQ8CEG5 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Ccdc28bQ8CEG5 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccdc28bQ8CEG5 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ccdc28bQ8CEG5 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Ccdc28bQ8CEG5 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Ccdc28bQ8CEG5 Serpina3f-203ENSMUST00000167049 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccdc28bQ8CEG5 Gm37731-201ENSMUST00000194545 2237 ntBASIC10.46□□□□□ -0.74
Ccdc28bQ8CEG5 Mfsd2b-204ENSMUST00000137337 2641 ntTSL 2 BASIC10.46□□□□□ -0.74
Ccdc28bQ8CEG5 Amotl1-206ENSMUST00000223132 3046 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Ccdc28bQ8CEG5 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC10.46□□□□□ -0.74
Ccdc28bQ8CEG5 Dcx-202ENSMUST00000087313 3120 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccdc28bQ8CEG5 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccdc28bQ8CEG5 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccdc28bQ8CEG5 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccdc28bQ8CEG5 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Ubap2-201ENSMUST00000030143 4368 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Slc2a1-201ENSMUST00000030398 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Slc26a1-202ENSMUST00000119270 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Sox2ot-211ENSMUST00000197977 2970 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Siglech-201ENSMUST00000060416 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Apol11b-204ENSMUST00000181467 1933 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm29101-201ENSMUST00000188329 1471 ntBASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm23272-201ENSMUST00000104053 129 ntBASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm11836-201ENSMUST00000121022 441 ntBASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm7047-201ENSMUST00000196224 1063 ntBASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Rnf13-201ENSMUST00000041826 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms