Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Gm19353-201ENSMUST00000184561 445 ntBASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Fam228aQ8CDW1 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Gm13045-201ENSMUST00000119019 712 ntBASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Gm14942-201ENSMUST00000119642 336 ntBASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Gm20392-201ENSMUST00000173047 701 ntBASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 5330439K02Rik-201ENSMUST00000180953 2312 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Tbck-202ENSMUST00000169172 6578 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fam228aQ8CDW1 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Gm6425-201ENSMUST00000136332 790 ntBASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Fam228aQ8CDW1 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms