Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.35□□□□□ -0.43
Alx1Q8C8B0 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Gm3926-201ENSMUST00000223378 1123 ntBASIC12.35□□□□□ -0.43
Alx1Q8C8B0 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.35□□□□□ -0.43
Alx1Q8C8B0 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Gm10580-201ENSMUST00000097985 396 ntBASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Gm10582-201ENSMUST00000097987 396 ntBASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Gm10583-201ENSMUST00000097988 396 ntBASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 AC154640.1-203ENSMUST00000228316 1618 ntBASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Gm11979-201ENSMUST00000119629 743 ntBASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Gm5808-201ENSMUST00000178090 357 ntBASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Gm6291-201ENSMUST00000179994 309 ntBASIC12.34□□□□□ -0.43
Alx1Q8C8B0 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 AC169511.1-201ENSMUST00000227639 995 ntBASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Gm9791-201ENSMUST00000060997 447 ntBASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Gm37583-201ENSMUST00000195460 2487 ntBASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Alx1Q8C8B0 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Alx1Q8C8B0 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Alx1Q8C8B0 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Alx1Q8C8B0 Gm45663-201ENSMUST00000210429 1632 ntBASIC12.33□□□□□ -0.43
Alx1Q8C8B0 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Alx1Q8C8B0 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm14052-201ENSMUST00000121434 1031 ntBASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm15258-201ENSMUST00000153801 741 ntBASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm20493-201ENSMUST00000173706 213 ntBASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm37232-201ENSMUST00000194887 367 ntBASIC12.33□□□□□ -0.44
Alx1Q8C8B0 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Alx1Q8C8B0 Gm43547-201ENSMUST00000197729 328 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms