Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 AC164883.7-201ENSMUST00000228534 851 ntBASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Gm43625-201ENSMUST00000199177 1539 ntBASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Gm12990-201ENSMUST00000120372 468 ntBASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Gm8723-201ENSMUST00000166076 820 ntBASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Gm8701-201ENSMUST00000169259 874 ntBASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Gm37141-201ENSMUST00000191938 422 ntBASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Gm43912-201ENSMUST00000204352 538 ntBASIC11.66□□□□□ -0.54
Trim9Q8C7M3 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 BC106175-202ENSMUST00000219344 1213 ntBASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim9Q8C7M3 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Gm42974-201ENSMUST00000199556 2654 ntBASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Gm13351-201ENSMUST00000118087 414 ntBASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Gm8492-201ENSMUST00000182375 987 ntBASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Gm6423-201ENSMUST00000204315 934 ntBASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Gm7600-201ENSMUST00000209657 785 ntBASIC11.65□□□□□ -0.54
Trim9Q8C7M3 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Atf7-201ENSMUST00000096143 390 ntBASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Gm13498-201ENSMUST00000119159 2166 ntBASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trim9Q8C7M3 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim9Q8C7M3 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms