Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 AC130477.1-201ENSMUST00000226982 420 ntBASIC9.59□□□□□ -0.87
SgcbP82349 Gm8181-201ENSMUST00000062242 669 ntBASIC9.59□□□□□ -0.87
SgcbP82349 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
SgcbP82349 Gm7536-201ENSMUST00000077389 444 ntBASIC9.59□□□□□ -0.87
SgcbP82349 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
SgcbP82349 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
SgcbP82349 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
SgcbP82349 Lpin1-201ENSMUST00000067124 5581 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.59□□□□□ -0.87
SgcbP82349 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC9.59□□□□□ -0.87
SgcbP82349 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
SgcbP82349 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
SgcbP82349 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.59□□□□□ -0.87
SgcbP82349 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
SgcbP82349 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
SgcbP82349 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC9.58□□□□□ -0.88
SgcbP82349 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
SgcbP82349 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
SgcbP82349 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Gm22937-201ENSMUST00000103954 131 ntBASIC9.58□□□□□ -0.88
SgcbP82349 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC9.58□□□□□ -0.88
SgcbP82349 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Gm25318-201ENSMUST00000122554 314 ntBASIC9.58□□□□□ -0.88
SgcbP82349 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC9.58□□□□□ -0.88
SgcbP82349 Gm6425-201ENSMUST00000136332 790 ntBASIC9.58□□□□□ -0.88
SgcbP82349 Gm16288-201ENSMUST00000137940 367 ntBASIC9.58□□□□□ -0.88
SgcbP82349 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC9.58□□□□□ -0.88
SgcbP82349 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC9.58□□□□□ -0.88
SgcbP82349 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.58□□□□□ -0.88
SgcbP82349 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
SgcbP82349 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Gm27441-201ENSMUST00000185000 105 ntBASIC9.58□□□□□ -0.88
SgcbP82349 Gm19918-201ENSMUST00000194858 400 ntBASIC9.58□□□□□ -0.88
SgcbP82349 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
SgcbP82349 Gm7047-201ENSMUST00000196224 1063 ntBASIC9.58□□□□□ -0.88
SgcbP82349 Gm43097-201ENSMUST00000196867 151 ntBASIC9.58□□□□□ -0.88
SgcbP82349 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
SgcbP82349 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC9.58□□□□□ -0.88
SgcbP82349 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC9.58□□□□□ -0.88
SgcbP82349 AC131743.3-201ENSMUST00000222099 662 ntBASIC9.58□□□□□ -0.88
SgcbP82349 AC162940.1-201ENSMUST00000224745 1167 ntBASIC9.58□□□□□ -0.88
SgcbP82349 AC154361.2-201ENSMUST00000224747 943 ntBASIC9.58□□□□□ -0.88
SgcbP82349 CT025679.1-201ENSMUST00000227106 449 ntBASIC9.58□□□□□ -0.88
SgcbP82349 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
SgcbP82349 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC9.58□□□□□ -0.88
SgcbP82349 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
SgcbP82349 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC9.58□□□□□ -0.88
SgcbP82349 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
SgcbP82349 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SgcbP82349 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
SgcbP82349 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SgcbP82349 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SgcbP82349 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SgcbP82349 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.57□□□□□ -0.88
SgcbP82349 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
SgcbP82349 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SgcbP82349 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SgcbP82349 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SgcbP82349 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SgcbP82349 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SgcbP82349 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SgcbP82349 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SgcbP82349 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SgcbP82349 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SgcbP82349 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms