Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Nkx2-6P43688 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC10.09□□□□□ -0.79
Nkx2-6P43688 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gm23255-201ENSMUST00000102244 110 ntBASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gm5510-201ENSMUST00000117826 486 ntBASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gm16209-201ENSMUST00000118457 627 ntBASIC10.08□□□□□ -0.8
Nkx2-6P43688 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gng5-ps-201ENSMUST00000120931 205 ntBASIC10.08□□□□□ -0.8
Nkx2-6P43688 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gm10171-201ENSMUST00000126220 628 ntBASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gm7928-201ENSMUST00000181249 701 ntBASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gm5274-201ENSMUST00000182641 1003 ntBASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gm27833-201ENSMUST00000184285 124 ntBASIC10.08□□□□□ -0.8
Nkx2-6P43688 Mir6953-201ENSMUST00000184745 68 ntBASIC10.08□□□□□ -0.8
Nkx2-6P43688 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gm43610-201ENSMUST00000199117 365 ntBASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx2-6P43688 CT030035.1-201ENSMUST00000223964 935 ntBASIC10.08□□□□□ -0.8
Nkx2-6P43688 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gm8894-201ENSMUST00000074642 666 ntBASIC10.08□□□□□ -0.8
Nkx2-6P43688 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gm10233-201ENSMUST00000089275 628 ntBASIC10.08□□□□□ -0.8
Nkx2-6P43688 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Nkx2-6P43688 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nkx2-6P43688 Gm17836-201ENSMUST00000191976 1302 ntBASIC10.07□□□□□ -0.8
Nkx2-6P43688 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Gm45719-201ENSMUST00000207954 1662 ntBASIC10.07□□□□□ -0.8
Nkx2-6P43688 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-6P43688 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC10.07□□□□□ -0.8
Nkx2-6P43688 Mir291b-201ENSMUST00000104838 79 ntBASIC10.07□□□□□ -0.8
Nkx2-6P43688 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Gm11919-201ENSMUST00000117609 721 ntBASIC10.07□□□□□ -0.8
Nkx2-6P43688 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx2-6P43688 Gm6425-201ENSMUST00000136332 790 ntBASIC10.07□□□□□ -0.8
Nkx2-6P43688 Gm13857-201ENSMUST00000139645 173 ntBASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms