Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Traf1P39428 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Traf1P39428 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.36□□□□□ -0.43
Traf1P39428 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Traf1P39428 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Traf1P39428 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Traf1P39428 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Traf1P39428 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Traf1P39428 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Traf1P39428 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Gm5472-201ENSMUST00000178604 1678 ntBASIC12.35□□□□□ -0.43
Traf1P39428 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Gm6092-201ENSMUST00000121659 2029 ntBASIC12.35□□□□□ -0.43
Traf1P39428 Gm19327-201ENSMUST00000220651 3271 ntBASIC12.35□□□□□ -0.43
Traf1P39428 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Gm11573-201ENSMUST00000119956 394 ntBASIC12.35□□□□□ -0.43
Traf1P39428 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Mir432-201ENSMUST00000157230 75 ntBASIC12.35□□□□□ -0.43
Traf1P39428 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Traf1P39428 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Traf1P39428 Gm38038-201ENSMUST00000193803 259 ntBASIC12.35□□□□□ -0.43
Traf1P39428 Gm37207-201ENSMUST00000194284 296 ntBASIC12.35□□□□□ -0.43
Traf1P39428 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC12.35□□□□□ -0.43
Traf1P39428 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Gm19640-201ENSMUST00000214849 464 ntBASIC12.35□□□□□ -0.43
Traf1P39428 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.35□□□□□ -0.43
Traf1P39428 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Traf1P39428 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.35□□□□□ -0.43
Traf1P39428 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Traf1P39428 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.35□□□□□ -0.43
Traf1P39428 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Traf1P39428 Gm45719-201ENSMUST00000207954 1662 ntBASIC12.35□□□□□ -0.43
Traf1P39428 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.35□□□□□ -0.43
Traf1P39428 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.35□□□□□ -0.43
Traf1P39428 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Traf1P39428 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.35□□□□□ -0.43
Traf1P39428 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Traf1P39428 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Traf1P39428 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Traf1P39428 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Traf1P39428 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Traf1P39428 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Traf1P39428 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Traf1P39428 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Traf1P39428 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Traf1P39428 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Traf1P39428 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Traf1P39428 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Traf1P39428 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Traf1P39428 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Traf1P39428 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Traf1P39428 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.34□□□□□ -0.43
Traf1P39428 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Traf1P39428 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Traf1P39428 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.34□□□□□ -0.43
Traf1P39428 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.34□□□□□ -0.43
Traf1P39428 Gm12418-201ENSMUST00000118116 942 ntBASIC12.34□□□□□ -0.43
Traf1P39428 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.34□□□□□ -0.43
Traf1P39428 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.34□□□□□ -0.43
Traf1P39428 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Traf1P39428 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.34□□□□□ -0.43
Traf1P39428 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC12.34□□□□□ -0.43
Traf1P39428 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.34□□□□□ -0.43
Traf1P39428 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC12.34□□□□□ -0.43
Traf1P39428 Gm25872-201ENSMUST00000177784 100 ntBASIC12.34□□□□□ -0.43
Traf1P39428 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC12.34□□□□□ -0.43
Traf1P39428 Gm29543-201ENSMUST00000188138 967 ntBASIC12.34□□□□□ -0.43
Traf1P39428 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.34□□□□□ -0.43
Traf1P39428 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC12.34□□□□□ -0.43
Traf1P39428 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Traf1P39428 AC155300.1-201ENSMUST00000219134 480 ntBASIC12.34□□□□□ -0.43
Traf1P39428 CT030195.2-201ENSMUST00000226074 1286 ntBASIC12.34□□□□□ -0.43
Traf1P39428 AC101205.2-201ENSMUST00000226206 715 ntBASIC12.34□□□□□ -0.43
Traf1P39428 AC164099.1-201ENSMUST00000227780 333 ntBASIC12.34□□□□□ -0.43
Traf1P39428 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Traf1P39428 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Traf1P39428 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
Traf1P39428 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Traf1P39428 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms