Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Cd28P31041 Olfr804-202ENSMUST00000213331 5737 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 Cipc-205ENSMUST00000187814 4098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Cipc-201ENSMUST00000038369 4098 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Gm38116-201ENSMUST00000193873 1533 ntBASIC9.26□□□□□ -0.93
Cd28P31041 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Igf2bp2-202ENSMUST00000115379 3078 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 Mrpl51-201ENSMUST00000032485 3427 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Gm7103-201ENSMUST00000195642 1852 ntBASIC9.26□□□□□ -0.93
Cd28P31041 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Zfp958-202ENSMUST00000202692 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Kdm2b-205ENSMUST00000121739 4107 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Gm23272-201ENSMUST00000104053 129 ntBASIC9.26□□□□□ -0.93
Cd28P31041 Gm11988-201ENSMUST00000122321 1069 ntBASIC9.26□□□□□ -0.93
Cd28P31041 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Gm26083-201ENSMUST00000157904 193 ntBASIC9.26□□□□□ -0.93
Cd28P31041 Gm5244-201ENSMUST00000164001 339 ntBASIC9.26□□□□□ -0.93
Cd28P31041 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC9.26□□□□□ -0.93
Cd28P31041 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC9.26□□□□□ -0.93
Cd28P31041 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.26□□□□□ -0.93
Cd28P31041 Gm6677-201ENSMUST00000195100 441 ntBASIC9.26□□□□□ -0.93
Cd28P31041 Gm37020-201ENSMUST00000195303 992 ntBASIC9.26□□□□□ -0.93
Cd28P31041 Gm42780-201ENSMUST00000197083 734 ntBASIC9.26□□□□□ -0.93
Cd28P31041 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC9.26□□□□□ -0.93
Cd28P31041 AU022133-201ENSMUST00000200601 873 ntBASIC9.26□□□□□ -0.93
Cd28P31041 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Cd28P31041 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.26□□□□□ -0.93
Cd28P31041 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 CT025679.1-201ENSMUST00000227106 449 ntBASIC9.26□□□□□ -0.93
Cd28P31041 BX649293.1-201ENSMUST00000227437 631 ntBASIC9.26□□□□□ -0.93
Cd28P31041 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Cd28P31041 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 Odf2-205ENSMUST00000113757 3082 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC9.26□□□□□ -0.93
Cd28P31041 Ube2f-203ENSMUST00000171165 5654 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Utp15-201ENSMUST00000040972 4120 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Hinfp-205ENSMUST00000216508 5333 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Cd28P31041 Rph3a-204ENSMUST00000202406 4096 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cd28P31041 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC9.25□□□□□ -0.93
Cd28P31041 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cd28P31041 Dhx35-202ENSMUST00000109478 3284 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Cd28P31041 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cd28P31041 Adamts4-202ENSMUST00000111315 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cd28P31041 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC9.25□□□□□ -0.93
Cd28P31041 Vash2-202ENSMUST00000166139 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cd28P31041 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cd28P31041 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC9.25□□□□□ -0.93
Cd28P31041 Xpo5-201ENSMUST00000087031 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cd28P31041 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC9.25□□□□□ -0.93
Cd28P31041 Kng1-202ENSMUST00000039492 1985 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cd28P31041 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cd28P31041 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cd28P31041 Wiz-203ENSMUST00000087703 4175 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cd28P31041 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.25□□□□□ -0.93
Cd28P31041 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms