Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm8492-201ENSMUST00000182375 987 ntBASIC9.43□□□□□ -0.9
P20040 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.43□□□□□ -0.9
P20040 Gm29410-201ENSMUST00000188383 694 ntBASIC9.43□□□□□ -0.9
P20040 Gm30946-201ENSMUST00000198288 724 ntBASIC9.43□□□□□ -0.9
P20040 Gm3726-201ENSMUST00000203110 785 ntBASIC9.43□□□□□ -0.9
P20040 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC9.43□□□□□ -0.9
P20040 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.43□□□□□ -0.9
P20040 AC153152.3-201ENSMUST00000222188 1135 ntBASIC9.43□□□□□ -0.9
P20040 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.43□□□□□ -0.9
P20040 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.43□□□□□ -0.9
P20040 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 AC117648.1-201ENSMUST00000219777 2510 ntBASIC9.43□□□□□ -0.9
P20040 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
P20040 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
P20040 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.42□□□□□ -0.9
P20040 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.42□□□□□ -0.9
P20040 Gm6024-201ENSMUST00000117850 1558 ntBASIC9.42□□□□□ -0.9
P20040 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Gm9220-201ENSMUST00000190721 2544 ntBASIC9.42□□□□□ -0.9
P20040 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.42□□□□□ -0.9
P20040 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Gm5308-201ENSMUST00000196752 1354 ntBASIC9.42□□□□□ -0.9
P20040 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.42□□□□□ -0.9
P20040 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.42□□□□□ -0.9
P20040 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.42□□□□□ -0.9
P20040 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Gm15264-201ENSMUST00000118050 502 ntBASIC9.42□□□□□ -0.9
P20040 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC9.42□□□□□ -0.9
P20040 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.42□□□□□ -0.9
P20040 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC9.42□□□□□ -0.9
P20040 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC9.42□□□□□ -0.9
P20040 Gm39288-201ENSMUST00000210554 446 ntBASIC9.42□□□□□ -0.9
P20040 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
P20040 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC9.42□□□□□ -0.9
P20040 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
P20040 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Gm7103-201ENSMUST00000195642 1852 ntBASIC9.42□□□□□ -0.9
P20040 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
P20040 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
P20040 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
P20040 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
P20040 AC156802.2-203ENSMUST00000226032 1906 ntBASIC9.41□□□□□ -0.9
P20040 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Mir453-201ENSMUST00000104732 82 ntBASIC9.41□□□□□ -0.9
P20040 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC9.41□□□□□ -0.9
P20040 Gm12030-201ENSMUST00000121917 223 ntBASIC9.41□□□□□ -0.9
P20040 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC9.41□□□□□ -0.9
P20040 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.41□□□□□ -0.9
P20040 Gm22379-201ENSMUST00000157480 131 ntBASIC9.41□□□□□ -0.9
P20040 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC9.41□□□□□ -0.9
P20040 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC9.41□□□□□ -0.9
P20040 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC9.41□□□□□ -0.9
P20040 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.41□□□□□ -0.9
P20040 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.41□□□□□ -0.9
P20040 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.41□□□□□ -0.9
P20040 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.41□□□□□ -0.9
P20040 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
P20040 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
P20040 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.41□□□□□ -0.9
P20040 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC9.41□□□□□ -0.9
P20040 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
P20040 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
P20040 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms