Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
UbbP0CG49 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
UbbP0CG49 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
UbbP0CG49 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
UbbP0CG49 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
UbbP0CG49 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
UbbP0CG49 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
UbbP0CG49 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
UbbP0CG49 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
UbbP0CG49 Gm42449-201ENSMUST00000200349 2258 ntBASIC9.21□□□□□ -0.94
UbbP0CG49 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC9.21□□□□□ -0.94
UbbP0CG49 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
UbbP0CG49 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
UbbP0CG49 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
UbbP0CG49 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
UbbP0CG49 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
UbbP0CG49 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
UbbP0CG49 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC9.21□□□□□ -0.94
UbbP0CG49 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC9.2□□□□□ -0.94
UbbP0CG49 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 AC117656.2-201ENSMUST00000224931 2215 ntBASIC9.2□□□□□ -0.94
UbbP0CG49 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
UbbP0CG49 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC9.2□□□□□ -0.94
UbbP0CG49 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
UbbP0CG49 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
UbbP0CG49 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
UbbP0CG49 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
UbbP0CG49 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Gm11411-201ENSMUST00000117951 719 ntBASIC9.2□□□□□ -0.94
UbbP0CG49 Gm15725-201ENSMUST00000119947 1090 ntBASIC9.2□□□□□ -0.94
UbbP0CG49 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC9.2□□□□□ -0.94
UbbP0CG49 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.2□□□□□ -0.94
UbbP0CG49 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC9.2□□□□□ -0.94
UbbP0CG49 Gm5244-201ENSMUST00000164001 339 ntBASIC9.2□□□□□ -0.94
UbbP0CG49 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
UbbP0CG49 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
UbbP0CG49 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC9.2□□□□□ -0.94
UbbP0CG49 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC9.2□□□□□ -0.94
UbbP0CG49 Gm42780-201ENSMUST00000197083 734 ntBASIC9.2□□□□□ -0.94
UbbP0CG49 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9.2□□□□□ -0.94
UbbP0CG49 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.2□□□□□ -0.94
UbbP0CG49 Gm17831-201ENSMUST00000205579 900 ntBASIC9.2□□□□□ -0.94
UbbP0CG49 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC9.2□□□□□ -0.94
UbbP0CG49 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.2□□□□□ -0.94
UbbP0CG49 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC9.2□□□□□ -0.94
UbbP0CG49 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC9.2□□□□□ -0.94
UbbP0CG49 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
UbbP0CG49 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
UbbP0CG49 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
UbbP0CG49 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Gm45867-201ENSMUST00000208201 2317 ntBASIC9.2□□□□□ -0.94
UbbP0CG49 Olfr55-202ENSMUST00000214888 4675 ntTSL 5 BASIC9.2□□□□□ -0.94
UbbP0CG49 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
UbbP0CG49 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
UbbP0CG49 Gm42460-201ENSMUST00000198863 2567 ntBASIC9.19□□□□□ -0.94
UbbP0CG49 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
UbbP0CG49 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms