Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Gm6158-201ENSMUST00000109467 904 ntBASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Gm11573-201ENSMUST00000119956 394 ntBASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Gm8723-201ENSMUST00000166076 820 ntBASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Gm8701-201ENSMUST00000169259 874 ntBASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.57□□□□□ -0.56
Chmp6P0C0A3 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Gm26670-202ENSMUST00000226862 340 ntBASIC11.57□□□□□ -0.56
Chmp6P0C0A3 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Gm11735-201ENSMUST00000106377 1581 ntBASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Gm18035-201ENSMUST00000211962 589 ntBASIC11.56□□□□□ -0.56
Chmp6P0C0A3 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.56□□□□□ -0.56
Chmp6P0C0A3 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Gm7589-201ENSMUST00000085631 534 ntBASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp6P0C0A3 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp6P0C0A3 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp6P0C0A3 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chmp6P0C0A3 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms