Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 CT009713.3-201ENSMUST00000224987 1565 ntBASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 AC124772.3-201ENSMUST00000222535 575 ntBASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 Gm5292-201ENSMUST00000073317 580 ntBASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Gm13527-201ENSMUST00000117926 691 ntBASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Gm16131-201ENSMUST00000131007 659 ntTSL 3 BASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Gm7924-201ENSMUST00000203975 785 ntBASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Gm19121-201ENSMUST00000215720 1022 ntBASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Cryab-206ENSMUST00000217475 1117 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Gm8256-202ENSMUST00000227964 828 ntBASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Gm8806-201ENSMUST00000120076 1407 ntBASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc180J3QNE4 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Krtap29-1-201ENSMUST00000105051 1029 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Gm24352-201ENSMUST00000158966 125 ntBASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 AC164614.1-201ENSMUST00000216038 397 ntBASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 AC154643.1-201ENSMUST00000225643 625 ntBASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Smim4-201ENSMUST00000049732 311 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Krtap6-3-201ENSMUST00000079151 444 ntBASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Gm37954-201ENSMUST00000195400 2071 ntBASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Gm7001-201ENSMUST00000219384 1465 ntBASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc180J3QNE4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Gm14239-201ENSMUST00000116491 685 ntBASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Pde7a-203ENSMUST00000121951 382 ntTSL 3 BASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Gm22616-201ENSMUST00000179783 100 ntBASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Gm2021-201ENSMUST00000190623 464 ntBASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 AC100406.1-201ENSMUST00000217305 480 ntBASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc180J3QNE4 Spata17-201ENSMUST00000027908 1303 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Gm8754-201ENSMUST00000118391 520 ntBASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Gm8163-201ENSMUST00000122020 1060 ntBASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Gm7847-201ENSMUST00000151645 777 ntBASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Gm8955-201ENSMUST00000182945 1008 ntBASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Olfr1155-201ENSMUST00000099843 945 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Ces1a-201ENSMUST00000095211 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc180J3QNE4 Anapc15-203ENSMUST00000098237 1328 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms