Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Gm38357-201ENSMUST00000195382 2464 ntBASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Gm23595-201ENSMUST00000104306 130 ntBASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm12684-201ENSMUST00000118675 999 ntBASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm20694-201ENSMUST00000176943 404 ntBASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm26272-201ENSMUST00000179241 132 ntBASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm6304-201ENSMUST00000096579 447 ntBASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm14005-210ENSMUST00000225087 1413 ntBASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm23132-201ENSMUST00000104254 132 ntBASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm8152-201ENSMUST00000120842 637 ntBASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 CT025603.1-201ENSMUST00000224040 448 ntBASIC8.9□□□□□ -0.98
Usf3B2RUQ2 AC102847.1-202ENSMUST00000226313 1245 ntBASIC8.9□□□□□ -0.98
Usf3B2RUQ2 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Usf3B2RUQ2 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Usf3B2RUQ2 Gm12799-201ENSMUST00000118151 2560 ntBASIC8.9□□□□□ -0.99
Usf3B2RUQ2 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
Usf3B2RUQ2 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Usf3B2RUQ2 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Usf3B2RUQ2 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.99
Usf3B2RUQ2 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Usf3B2RUQ2 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Usf3B2RUQ2 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.99
Usf3B2RUQ2 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Usf3B2RUQ2 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Usf3B2RUQ2 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC8.89□□□□□ -0.99
Usf3B2RUQ2 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usf3B2RUQ2 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usf3B2RUQ2 Gm12418-201ENSMUST00000118116 942 ntBASIC8.89□□□□□ -0.99
Usf3B2RUQ2 Gm12345-201ENSMUST00000119288 898 ntBASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms