Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Tmem184b-205ENSMUST00000228002 3315 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm15032-201ENSMUST00000118547 411 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm23081-201ENSMUST00000157845 297 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm8388-201ENSMUST00000193000 756 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 AC152946.3-201ENSMUST00000219424 280 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm15283-202ENSMUST00000221427 818 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Ctsw-201ENSMUST00000025844 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Zfp640-201ENSMUST00000071320 894 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Mir187-201ENSMUST00000083598 61 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 AC139845.1-201ENSMUST00000147013 1334 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm16387-201ENSMUST00000180990 2632 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm8818-201ENSMUST00000110797 1047 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm12696-201ENSMUST00000122361 905 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Myl12a-202ENSMUST00000123686 804 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm6967-201ENSMUST00000182599 1007 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Etv3l-201ENSMUST00000193196 325 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 AC115891.2-201ENSMUST00000218448 1341 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm43225-201ENSMUST00000201381 1439 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Eif5a-204ENSMUST00000108607 852 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm11621-201ENSMUST00000118253 589 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm12738-201ENSMUST00000122349 536 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm38320-201ENSMUST00000192767 1281 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm34727-201ENSMUST00000195175 529 ntBASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm31363-201ENSMUST00000199362 541 ntTSL 3 BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdh23Q99PF4 Gm16299-201ENSMUST00000162724 2766 ntTSL 3 BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Snap25-201ENSMUST00000028727 2116 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Nr1h4-202ENSMUST00000105296 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Gm25092-201ENSMUST00000103996 129 ntBASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Gm11605-201ENSMUST00000120413 646 ntBASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Gm13713-201ENSMUST00000139377 703 ntTSL 3 BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Gm13713-202ENSMUST00000155472 285 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Gm3752-202ENSMUST00000167833 450 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Gm10128-201ENSMUST00000171360 615 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Gm2956-202ENSMUST00000178722 450 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Gm10340-202ENSMUST00000188235 615 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Gm6684-201ENSMUST00000053717 685 ntBASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Fam35a-201ENSMUST00000111917 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Ubox5-201ENSMUST00000028761 3731 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Nbr1-201ENSMUST00000071537 3239 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Ccnc-202ENSMUST00000102997 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Taf9b-202ENSMUST00000113495 2512 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Syncrip-211ENSMUST00000174688 3176 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Gm15645-202ENSMUST00000183393 1299 ntBASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Gm8982-201ENSMUST00000184198 1295 ntBASIC10.42□□□□□ -0.74
Cdh23Q99PF4 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 C920021L13Rik-202ENSMUST00000142433 1330 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 4930470P17Rik-201ENSMUST00000062355 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Gpn1-201ENSMUST00000076949 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Fubp1-220ENSMUST00000200524 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdh23Q99PF4 Gm37886-201ENSMUST00000195349 1513 ntBASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms