Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Scrt1Q99M85 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Scrt1Q99M85 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Scrt1Q99M85 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Scrt1Q99M85 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Scrt1Q99M85 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.4□□□□□ -0.91
Scrt1Q99M85 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.39□□□□□ -0.91
Scrt1Q99M85 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC9.39□□□□□ -0.91
Scrt1Q99M85 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Scrt1Q99M85 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Gm23439-201ENSMUST00000104292 132 ntBASIC9.39□□□□□ -0.91
Scrt1Q99M85 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Gm16165-201ENSMUST00000160140 795 ntBASIC9.39□□□□□ -0.91
Scrt1Q99M85 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Gm4775-201ENSMUST00000169588 402 ntBASIC9.39□□□□□ -0.91
Scrt1Q99M85 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Gm7880-201ENSMUST00000203748 871 ntBASIC9.39□□□□□ -0.91
Scrt1Q99M85 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC9.39□□□□□ -0.91
Scrt1Q99M85 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC9.39□□□□□ -0.91
Scrt1Q99M85 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.39□□□□□ -0.91
Scrt1Q99M85 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Gm5278-201ENSMUST00000055957 552 ntBASIC9.39□□□□□ -0.91
Scrt1Q99M85 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Gm7589-201ENSMUST00000085631 534 ntBASIC9.39□□□□□ -0.91
Scrt1Q99M85 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Rims2-204ENSMUST00000226410 3685 ntBASIC9.39□□□□□ -0.91
Scrt1Q99M85 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.39□□□□□ -0.91
Scrt1Q99M85 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Scrt1Q99M85 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.38□□□□□ -0.91
Scrt1Q99M85 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm24140-201ENSMUST00000122773 326 ntBASIC9.38□□□□□ -0.91
Scrt1Q99M85 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm5342-201ENSMUST00000181982 1003 ntBASIC9.38□□□□□ -0.91
Scrt1Q99M85 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.38□□□□□ -0.91
Scrt1Q99M85 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm43966-201ENSMUST00000203301 612 ntBASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm43997-201ENSMUST00000203986 1005 ntBASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms