Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim29Q8R2Q0 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim29Q8R2Q0 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Trim29Q8R2Q0 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim29Q8R2Q0 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim29Q8R2Q0 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trim29Q8R2Q0 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.15□□□□□ -0.47
Trim29Q8R2Q0 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Gm6158-201ENSMUST00000109467 904 ntBASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Gm7719-201ENSMUST00000182374 975 ntBASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Gm9135-201ENSMUST00000182963 990 ntBASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Gm44740-201ENSMUST00000205603 1614 ntBASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim29Q8R2Q0 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Mir1901-201ENSMUST00000122616 78 ntBASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 AC102847.1-202ENSMUST00000226313 1245 ntBASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 AC154171.2-201ENSMUST00000225219 2652 ntBASIC12.13□□□□□ -0.47
Trim29Q8R2Q0 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim29Q8R2Q0 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim29Q8R2Q0 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim29Q8R2Q0 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trim29Q8R2Q0 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim29Q8R2Q0 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim29Q8R2Q0 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim29Q8R2Q0 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim29Q8R2Q0 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms