Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.03□□□□□ -0.8
Clrn1Q8K445 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Gm18014-201ENSMUST00000183369 817 ntBASIC10.03□□□□□ -0.8
Clrn1Q8K445 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Gm38210-201ENSMUST00000191944 809 ntBASIC10.03□□□□□ -0.8
Clrn1Q8K445 Gm37860-201ENSMUST00000195380 1034 ntBASIC10.03□□□□□ -0.8
Clrn1Q8K445 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC10.03□□□□□ -0.8
Clrn1Q8K445 Gm3793-201ENSMUST00000204973 672 ntBASIC10.03□□□□□ -0.8
Clrn1Q8K445 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Gm9487-201ENSMUST00000216600 472 ntBASIC10.03□□□□□ -0.8
Clrn1Q8K445 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Gm43339-201ENSMUST00000200032 1606 ntBASIC10.03□□□□□ -0.8
Clrn1Q8K445 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Clrn1Q8K445 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Clrn1Q8K445 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Clrn1Q8K445 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Clrn1Q8K445 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.02□□□□□ -0.8
Clrn1Q8K445 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
Clrn1Q8K445 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Clrn1Q8K445 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC10.02□□□□□ -0.8
Clrn1Q8K445 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Clrn1Q8K445 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Gm15554-201ENSMUST00000120406 913 ntBASIC10.02□□□□□ -0.81
Clrn1Q8K445 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Gm38313-201ENSMUST00000191953 1266 ntBASIC10.02□□□□□ -0.81
Clrn1Q8K445 Gm19918-201ENSMUST00000194858 400 ntBASIC10.02□□□□□ -0.81
Clrn1Q8K445 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Gm31274-201ENSMUST00000197356 229 ntBASIC10.02□□□□□ -0.81
Clrn1Q8K445 Gm42710-201ENSMUST00000200608 985 ntBASIC10.02□□□□□ -0.81
Clrn1Q8K445 Gm6423-201ENSMUST00000204315 934 ntBASIC10.02□□□□□ -0.81
Clrn1Q8K445 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Gm8170-201ENSMUST00000218581 945 ntBASIC10.02□□□□□ -0.81
Clrn1Q8K445 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 CT030653.1-201ENSMUST00000224382 1279 ntBASIC10.02□□□□□ -0.81
Clrn1Q8K445 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.02□□□□□ -0.81
Clrn1Q8K445 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.02□□□□□ -0.81
Clrn1Q8K445 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Clrn1Q8K445 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms