Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Gm5526-201ENSMUST00000153604 423 ntBASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Gm24294-201ENSMUST00000158295 277 ntBASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 AC101205.2-201ENSMUST00000226206 715 ntBASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 AC166361.2-201ENSMUST00000219269 1415 ntBASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccdc17Q8CE13 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccdc17Q8CE13 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccdc17Q8CE13 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccdc17Q8CE13 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 AC154352.1-201ENSMUST00000221477 2365 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm5403-201ENSMUST00000117105 2795 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm11919-201ENSMUST00000117609 721 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm12463-201ENSMUST00000118271 849 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm20493-201ENSMUST00000173706 213 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm6644-201ENSMUST00000186507 951 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm6518-201ENSMUST00000208450 342 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm45310-201ENSMUST00000210436 275 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm25514-201ENSMUST00000083860 135 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 AC107763.1-201ENSMUST00000226082 1365 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc17Q8CE13 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms