Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Gm15285-201ENSMUST00000119271 473 ntBASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Gm16288-201ENSMUST00000137940 367 ntBASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Gm26208-201ENSMUST00000158677 124 ntBASIC10.94□□□□□ -0.66
Trub1Q8C0D0 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Gm4430-202ENSMUST00000193902 1041 ntBASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Gm26670-202ENSMUST00000226862 340 ntBASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Gm45719-201ENSMUST00000207954 1662 ntBASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trub1Q8C0D0 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Gm8216-201ENSMUST00000117232 601 ntBASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Gm24248-201ENSMUST00000157321 322 ntBASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Gm9372-201ENSMUST00000168454 430 ntBASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Gm8022-201ENSMUST00000191763 904 ntBASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.93□□□□□ -0.66
Trub1Q8C0D0 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.93□□□□□ -0.66
Trub1Q8C0D0 AC102847.1-202ENSMUST00000226313 1245 ntBASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Gm43372-201ENSMUST00000202662 3016 ntBASIC10.93□□□□□ -0.66
Trub1Q8C0D0 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Gm25661-201ENSMUST00000157704 296 ntBASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Gm25072-201ENSMUST00000175233 235 ntBASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms