Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Gm13413-201ENSMUST00000120953 602 ntBASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Gstm1-202ENSMUST00000126593 828 ntTSL 3 BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Gm26021-201ENSMUST00000158664 131 ntBASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Scgb1b21-201ENSMUST00000170232 268 ntBASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Gm25694-201ENSMUST00000175448 282 ntBASIC12.32□□□□□ -0.44
Nup98Q6PFD9 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Gm5259-201ENSMUST00000191231 800 ntBASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Gm43761-201ENSMUST00000202132 991 ntBASIC12.32□□□□□ -0.44
Nup98Q6PFD9 AC151971.6-201ENSMUST00000216193 866 ntBASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup98Q6PFD9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Olfr1511-202ENSMUST00000214168 1468 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Ttll2-201ENSMUST00000115747 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Fut8-202ENSMUST00000171770 2765 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Gm11608-202ENSMUST00000153049 877 ntTSL 3 BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Gm29617-201ENSMUST00000185730 610 ntBASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Gemin8-201ENSMUST00000056410 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Gm45110-201ENSMUST00000205704 1402 ntBASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup98Q6PFD9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm37036-201ENSMUST00000192836 2506 ntBASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Drc3-201ENSMUST00000070805 2061 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Fhl3-202ENSMUST00000106199 1139 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm12736-201ENSMUST00000119330 236 ntBASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm12011-201ENSMUST00000119734 618 ntBASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm40332-201ENSMUST00000199847 938 ntBASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm18749-201ENSMUST00000222410 692 ntBASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm37582-201ENSMUST00000192953 1409 ntBASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm3712-201ENSMUST00000118523 2071 ntBASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm24471-201ENSMUST00000104485 131 ntBASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm12168-201ENSMUST00000119051 368 ntBASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm2328-201ENSMUST00000193525 535 ntBASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm43066-201ENSMUST00000199589 1260 ntBASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm7812-201ENSMUST00000203479 874 ntBASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 n-R5s25-201ENSMUST00000082923 119 ntBASIC12.3□□□□□ -0.44
Nup98Q6PFD9 AU015228-201ENSMUST00000121103 1320 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms