Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Gm22341-201ENSMUST00000083775 129 ntBASIC12.06□□□□□ -0.48
GabpaQ00422 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC12.06□□□□□ -0.48
GabpaQ00422 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC12.06□□□□□ -0.48
GabpaQ00422 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.06□□□□□ -0.48
GabpaQ00422 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
GabpaQ00422 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
GabpaQ00422 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
GabpaQ00422 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
GabpaQ00422 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.05□□□□□ -0.48
GabpaQ00422 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Gm45663-201ENSMUST00000210429 1632 ntBASIC12.05□□□□□ -0.48
GabpaQ00422 AC154640.1-203ENSMUST00000228316 1618 ntBASIC12.05□□□□□ -0.48
GabpaQ00422 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Gm22582-201ENSMUST00000102283 94 ntBASIC12.05□□□□□ -0.48
GabpaQ00422 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
GabpaQ00422 Gm24470-201ENSMUST00000104486 132 ntBASIC12.05□□□□□ -0.48
GabpaQ00422 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Gm11573-201ENSMUST00000119956 394 ntBASIC12.05□□□□□ -0.48
GabpaQ00422 Gm15554-201ENSMUST00000120406 913 ntBASIC12.05□□□□□ -0.48
GabpaQ00422 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC12.05□□□□□ -0.48
GabpaQ00422 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC12.05□□□□□ -0.48
GabpaQ00422 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.05□□□□□ -0.48
GabpaQ00422 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC12.05□□□□□ -0.48
GabpaQ00422 Gm22662-201ENSMUST00000175290 256 ntBASIC12.05□□□□□ -0.48
GabpaQ00422 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.05□□□□□ -0.48
GabpaQ00422 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Gm29157-201ENSMUST00000188753 612 ntBASIC12.05□□□□□ -0.48
GabpaQ00422 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.05□□□□□ -0.48
GabpaQ00422 Gm37858-201ENSMUST00000192759 1231 ntBASIC12.05□□□□□ -0.48
GabpaQ00422 Gm8625-201ENSMUST00000194185 1077 ntBASIC12.05□□□□□ -0.48
GabpaQ00422 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
GabpaQ00422 Gm6426-201ENSMUST00000209048 854 ntBASIC12.05□□□□□ -0.48
GabpaQ00422 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 AC149294.3-201ENSMUST00000226888 732 ntBASIC12.05□□□□□ -0.48
GabpaQ00422 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
GabpaQ00422 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.05□□□□□ -0.48
GabpaQ00422 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
GabpaQ00422 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.05□□□□□ -0.48
GabpaQ00422 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
GabpaQ00422 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
GabpaQ00422 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
GabpaQ00422 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
GabpaQ00422 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
GabpaQ00422 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.04□□□□□ -0.48
GabpaQ00422 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GabpaQ00422 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GabpaQ00422 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GabpaQ00422 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GabpaQ00422 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
GabpaQ00422 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
GabpaQ00422 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GabpaQ00422 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GabpaQ00422 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
GabpaQ00422 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
GabpaQ00422 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.04□□□□□ -0.48
GabpaQ00422 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
GabpaQ00422 Gm22751-201ENSMUST00000102077 109 ntBASIC12.04□□□□□ -0.48
GabpaQ00422 Mir692-3-201ENSMUST00000102079 109 ntBASIC12.04□□□□□ -0.48
GabpaQ00422 Mir692-2-201ENSMUST00000102081 109 ntBASIC12.04□□□□□ -0.48
GabpaQ00422 Mir181d-201ENSMUST00000102383 72 ntBASIC12.04□□□□□ -0.48
GabpaQ00422 Gm23604-201ENSMUST00000104311 132 ntBASIC12.04□□□□□ -0.48
GabpaQ00422 Gm24294-201ENSMUST00000158295 277 ntBASIC12.04□□□□□ -0.48
GabpaQ00422 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC12.04□□□□□ -0.48
GabpaQ00422 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
GabpaQ00422 Gm4705-201ENSMUST00000177415 354 ntBASIC12.04□□□□□ -0.48
GabpaQ00422 Gm27444-201ENSMUST00000184157 137 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms