Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hmgb1P63158 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hmgb1P63158 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Hmgb1P63158 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.76□□□□□ -0.53
Hmgb1P63158 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.76□□□□□ -0.53
Hmgb1P63158 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.76□□□□□ -0.53
Hmgb1P63158 Gm17391-201ENSMUST00000171036 126 ntBASIC11.76□□□□□ -0.53
Hmgb1P63158 Gm20392-201ENSMUST00000173047 701 ntBASIC11.76□□□□□ -0.53
Hmgb1P63158 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
Hmgb1P63158 Gm43097-201ENSMUST00000196867 151 ntBASIC11.76□□□□□ -0.53
Hmgb1P63158 Gm42780-201ENSMUST00000197083 734 ntBASIC11.76□□□□□ -0.53
Hmgb1P63158 Gm44100-201ENSMUST00000204329 436 ntBASIC11.76□□□□□ -0.53
Hmgb1P63158 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.76□□□□□ -0.53
Hmgb1P63158 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.76□□□□□ -0.53
Hmgb1P63158 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Hmgb1P63158 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Gm7589-201ENSMUST00000085631 534 ntBASIC11.76□□□□□ -0.53
Hmgb1P63158 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Hmgb1P63158 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC11.76□□□□□ -0.53
Hmgb1P63158 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Gm37516-201ENSMUST00000192593 1954 ntBASIC11.76□□□□□ -0.53
Hmgb1P63158 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.76□□□□□ -0.53
Hmgb1P63158 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.75□□□□□ -0.53
Hmgb1P63158 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hmgb1P63158 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 AC121286.2-201ENSMUST00000218069 2470 ntBASIC11.75□□□□□ -0.53
Hmgb1P63158 Nln-205ENSMUST00000224945 2486 ntBASIC11.75□□□□□ -0.53
Hmgb1P63158 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC11.75□□□□□ -0.53
Hmgb1P63158 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Gm15554-201ENSMUST00000120406 913 ntBASIC11.75□□□□□ -0.53
Hmgb1P63158 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.75□□□□□ -0.53
Hmgb1P63158 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.75□□□□□ -0.53
Hmgb1P63158 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.75□□□□□ -0.53
Hmgb1P63158 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Hmgb1P63158 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.75□□□□□ -0.53
Hmgb1P63158 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Gm42816-201ENSMUST00000198433 325 ntBASIC11.75□□□□□ -0.53
Hmgb1P63158 Gm5881-201ENSMUST00000204737 367 ntBASIC11.75□□□□□ -0.53
Hmgb1P63158 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Hmgb1P63158 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hmgb1P63158 Gm23680-201ENSMUST00000083162 164 ntBASIC11.75□□□□□ -0.53
Hmgb1P63158 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgb1P63158 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Hmgb1P63158 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hmgb1P63158 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Hmgb1P63158 Gm6425-201ENSMUST00000136332 790 ntBASIC11.74□□□□□ -0.53
Hmgb1P63158 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.74□□□□□ -0.53
Hmgb1P63158 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmgb1P63158 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Hmgb1P63158 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms