Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC9.35□□□□□ -0.91
Lsm6P62313 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC9.35□□□□□ -0.91
Lsm6P62313 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Gm22334-201ENSMUST00000158070 133 ntBASIC9.35□□□□□ -0.91
Lsm6P62313 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC9.35□□□□□ -0.91
Lsm6P62313 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Gm7719-201ENSMUST00000182374 975 ntBASIC9.35□□□□□ -0.91
Lsm6P62313 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC9.35□□□□□ -0.91
Lsm6P62313 Gm44304-201ENSMUST00000200509 145 ntBASIC9.35□□□□□ -0.91
Lsm6P62313 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Lsm6P62313 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC9.35□□□□□ -0.91
Lsm6P62313 Gm7082-201ENSMUST00000209880 969 ntBASIC9.35□□□□□ -0.91
Lsm6P62313 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC9.35□□□□□ -0.91
Lsm6P62313 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC9.35□□□□□ -0.91
Lsm6P62313 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.35□□□□□ -0.91
Lsm6P62313 Capsl-202ENSMUST00000226688 739 ntBASIC9.35□□□□□ -0.91
Lsm6P62313 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Lsm6P62313 Mir194-2-201ENSMUST00000083648 86 ntBASIC9.35□□□□□ -0.91
Lsm6P62313 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Gm37516-201ENSMUST00000192593 1954 ntBASIC9.35□□□□□ -0.91
Lsm6P62313 Gm45597-201ENSMUST00000211524 1994 ntBASIC9.35□□□□□ -0.91
Lsm6P62313 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Gm19680-201ENSMUST00000095050 1513 ntBASIC9.35□□□□□ -0.91
Lsm6P62313 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Lsm6P62313 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Lsm6P62313 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Lsm6P62313 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.34□□□□□ -0.91
Lsm6P62313 Gm17980-201ENSMUST00000217977 2349 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC9.34□□□□□ -0.91
Lsm6P62313 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.34□□□□□ -0.91
Lsm6P62313 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Lsm6P62313 Gm25053-201ENSMUST00000103982 133 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 Gm25922-201ENSMUST00000104281 130 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 Gm25063-201ENSMUST00000104666 94 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 Gm6322-201ENSMUST00000118789 1004 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 Gm14497-201ENSMUST00000119537 580 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 Gm12030-201ENSMUST00000121917 223 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 Mir1901-201ENSMUST00000122616 78 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC9.34□□□□□ -0.91
Lsm6P62313 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Gm24679-201ENSMUST00000158762 111 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC9.34□□□□□ -0.91
Lsm6P62313 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC9.34□□□□□ -0.91
Lsm6P62313 Gm22876-201ENSMUST00000175450 298 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC9.34□□□□□ -0.91
Lsm6P62313 Gm26976-201ENSMUST00000182929 908 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC9.34□□□□□ -0.91
Lsm6P62313 Gm29410-201ENSMUST00000188383 694 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 Gm25053-202ENSMUST00000199731 132 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 Gm43811-201ENSMUST00000202862 695 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Lsm6P62313 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC9.34□□□□□ -0.91
Lsm6P62313 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC9.34□□□□□ -0.91
Lsm6P62313 AC158392.3-201ENSMUST00000224271 1284 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Lsm6P62313 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Lsm6P62313 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Lsm6P62313 Gm5159-201ENSMUST00000212733 1652 ntBASIC9.34□□□□□ -0.91
Lsm6P62313 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Lsm6P62313 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
Lsm6P62313 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Lsm6P62313 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.34□□□□□ -0.91
Lsm6P62313 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm6P62313 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC9.34□□□□□ -0.91
Lsm6P62313 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Lsm6P62313 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Lsm6P62313 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Lsm6P62313 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms