Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC10.61□□□□□ -0.71
CtskP55097 AC158595.1-201ENSMUST00000217989 1435 ntBASIC10.61□□□□□ -0.71
CtskP55097 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
CtskP55097 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.61□□□□□ -0.71
CtskP55097 Gm11475-201ENSMUST00000118482 476 ntBASIC10.61□□□□□ -0.71
CtskP55097 Gm15136-201ENSMUST00000120552 533 ntBASIC10.61□□□□□ -0.71
CtskP55097 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.61□□□□□ -0.71
CtskP55097 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
CtskP55097 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC10.61□□□□□ -0.71
CtskP55097 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC10.61□□□□□ -0.71
CtskP55097 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.61□□□□□ -0.71
CtskP55097 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC10.61□□□□□ -0.71
CtskP55097 Gm12906-201ENSMUST00000154610 441 ntBASIC10.61□□□□□ -0.71
CtskP55097 Gm25226-201ENSMUST00000158198 123 ntBASIC10.61□□□□□ -0.71
CtskP55097 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.61□□□□□ -0.71
CtskP55097 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.61□□□□□ -0.71
CtskP55097 Gm4870-201ENSMUST00000198525 1251 ntBASIC10.61□□□□□ -0.71
CtskP55097 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.61□□□□□ -0.71
CtskP55097 Gm43506-201ENSMUST00000200675 753 ntBASIC10.61□□□□□ -0.71
CtskP55097 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.61□□□□□ -0.71
CtskP55097 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC10.61□□□□□ -0.71
CtskP55097 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.61□□□□□ -0.71
CtskP55097 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
CtskP55097 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
CtskP55097 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
CtskP55097 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.61□□□□□ -0.71
CtskP55097 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.61□□□□□ -0.71
CtskP55097 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.61□□□□□ -0.71
CtskP55097 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
CtskP55097 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.6□□□□□ -0.71
CtskP55097 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.6□□□□□ -0.71
CtskP55097 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CtskP55097 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.6□□□□□ -0.71
CtskP55097 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
CtskP55097 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
CtskP55097 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
CtskP55097 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.6□□□□□ -0.71
CtskP55097 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
CtskP55097 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
CtskP55097 Gm6461-201ENSMUST00000120015 633 ntBASIC10.6□□□□□ -0.71
CtskP55097 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC10.6□□□□□ -0.71
CtskP55097 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC10.6□□□□□ -0.71
CtskP55097 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC10.6□□□□□ -0.71
CtskP55097 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC10.6□□□□□ -0.71
CtskP55097 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Gm37684-201ENSMUST00000192779 355 ntBASIC10.6□□□□□ -0.71
CtskP55097 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.6□□□□□ -0.71
CtskP55097 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.6□□□□□ -0.71
CtskP55097 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.6□□□□□ -0.71
CtskP55097 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.6□□□□□ -0.71
CtskP55097 AC154435.1-201ENSMUST00000223938 959 ntBASIC10.6□□□□□ -0.71
CtskP55097 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CtskP55097 Gm5449-201ENSMUST00000081132 357 ntBASIC10.6□□□□□ -0.71
CtskP55097 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms