Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Pdx1P52946 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.5□□□□□ -0.73
Pdx1P52946 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pdx1P52946 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Pdx1P52946 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Pdx1P52946 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC10.5□□□□□ -0.73
Pdx1P52946 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Gm6771-201ENSMUST00000182716 1001 ntBASIC10.5□□□□□ -0.73
Pdx1P52946 Gm29155-201ENSMUST00000185910 269 ntBASIC10.5□□□□□ -0.73
Pdx1P52946 Gm5543-201ENSMUST00000193329 1091 ntBASIC10.5□□□□□ -0.73
Pdx1P52946 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Gm42780-201ENSMUST00000197083 734 ntBASIC10.5□□□□□ -0.73
Pdx1P52946 Gm44498-201ENSMUST00000199509 111 ntBASIC10.5□□□□□ -0.73
Pdx1P52946 Gm5298-201ENSMUST00000201122 892 ntBASIC10.5□□□□□ -0.73
Pdx1P52946 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.5□□□□□ -0.73
Pdx1P52946 Gm43969-201ENSMUST00000204833 535 ntBASIC10.5□□□□□ -0.73
Pdx1P52946 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.5□□□□□ -0.73
Pdx1P52946 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.5□□□□□ -0.73
Pdx1P52946 AC157650.1-201ENSMUST00000224582 610 ntBASIC10.5□□□□□ -0.73
Pdx1P52946 CT009713.2-201ENSMUST00000225532 1149 ntBASIC10.5□□□□□ -0.73
Pdx1P52946 AC130477.1-201ENSMUST00000226982 420 ntBASIC10.5□□□□□ -0.73
Pdx1P52946 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Pdx1P52946 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC10.5□□□□□ -0.73
Pdx1P52946 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Pdx1P52946 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC10.5□□□□□ -0.73
Pdx1P52946 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
Pdx1P52946 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Pdx1P52946 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Pdx1P52946 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Pdx1P52946 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pdx1P52946 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC10.5□□□□□ -0.73
Pdx1P52946 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.5□□□□□ -0.73
Pdx1P52946 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pdx1P52946 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.5□□□□□ -0.73
Pdx1P52946 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC10.49□□□□□ -0.73
Pdx1P52946 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Pdx1P52946 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.49□□□□□ -0.73
Pdx1P52946 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.49□□□□□ -0.73
Pdx1P52946 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.49□□□□□ -0.73
Pdx1P52946 Gm22582-201ENSMUST00000102283 94 ntBASIC10.49□□□□□ -0.73
Pdx1P52946 Gm11824-201ENSMUST00000120191 846 ntBASIC10.49□□□□□ -0.73
Pdx1P52946 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC10.49□□□□□ -0.73
Pdx1P52946 Gm26208-201ENSMUST00000158677 124 ntBASIC10.49□□□□□ -0.73
Pdx1P52946 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC10.49□□□□□ -0.73
Pdx1P52946 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.49□□□□□ -0.73
Pdx1P52946 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC10.49□□□□□ -0.73
Pdx1P52946 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Gm43811-201ENSMUST00000202862 695 ntBASIC10.49□□□□□ -0.73
Pdx1P52946 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Gm6390-201ENSMUST00000215034 589 ntBASIC10.49□□□□□ -0.73
Pdx1P52946 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC10.49□□□□□ -0.73
Pdx1P52946 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC10.49□□□□□ -0.73
Pdx1P52946 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pdx1P52946 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Pdx1P52946 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms