Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Mir671-201ENSMUST00000102432 98 ntBASIC11.26□□□□□ -0.61
Shmt1P50431 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
Shmt1P50431 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shmt1P50431 Gm13857-201ENSMUST00000139645 173 ntBASIC11.26□□□□□ -0.61
Shmt1P50431 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shmt1P50431 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC11.26□□□□□ -0.61
Shmt1P50431 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.26□□□□□ -0.61
Shmt1P50431 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.26□□□□□ -0.61
Shmt1P50431 AC161172.1-201ENSMUST00000227801 486 ntBASIC11.26□□□□□ -0.61
Shmt1P50431 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.26□□□□□ -0.61
Shmt1P50431 Mir194-2-201ENSMUST00000083648 86 ntBASIC11.26□□□□□ -0.61
Shmt1P50431 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shmt1P50431 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Shmt1P50431 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Shmt1P50431 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shmt1P50431 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shmt1P50431 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shmt1P50431 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.26□□□□□ -0.61
Shmt1P50431 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shmt1P50431 Gm42587-201ENSMUST00000198462 1981 ntBASIC11.26□□□□□ -0.61
Shmt1P50431 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shmt1P50431 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shmt1P50431 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shmt1P50431 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shmt1P50431 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC11.26□□□□□ -0.61
Shmt1P50431 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Shmt1P50431 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shmt1P50431 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shmt1P50431 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Shmt1P50431 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.25□□□□□ -0.61
Shmt1P50431 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.25□□□□□ -0.61
Shmt1P50431 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 BC043934-202ENSMUST00000185694 2356 ntBASIC11.25□□□□□ -0.61
Shmt1P50431 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Gm16459-201ENSMUST00000121443 686 ntBASIC11.25□□□□□ -0.61
Shmt1P50431 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Gm5526-201ENSMUST00000153604 423 ntBASIC11.25□□□□□ -0.61
Shmt1P50431 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Shmt1P50431 Mir8111-201ENSMUST00000184463 137 ntBASIC11.25□□□□□ -0.61
Shmt1P50431 Gm5881-201ENSMUST00000204737 367 ntBASIC11.25□□□□□ -0.61
Shmt1P50431 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.25□□□□□ -0.61
Shmt1P50431 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Shmt1P50431 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.25□□□□□ -0.61
Shmt1P50431 AC154585.1-201ENSMUST00000218917 997 ntBASIC11.25□□□□□ -0.61
Shmt1P50431 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 n-R5s71-201ENSMUST00000093668 119 ntBASIC11.25□□□□□ -0.61
Shmt1P50431 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Atf7-201ENSMUST00000096143 390 ntBASIC11.25□□□□□ -0.61
Shmt1P50431 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Shmt1P50431 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Shmt1P50431 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.25□□□□□ -0.61
Shmt1P50431 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Shmt1P50431 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Shmt1P50431 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shmt1P50431 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Shmt1P50431 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shmt1P50431 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC11.24□□□□□ -0.61
Shmt1P50431 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shmt1P50431 Gm32914-201ENSMUST00000203815 2228 ntBASIC11.24□□□□□ -0.61
Shmt1P50431 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shmt1P50431 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shmt1P50431 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shmt1P50431 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shmt1P50431 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shmt1P50431 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shmt1P50431 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.24□□□□□ -0.61
Shmt1P50431 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Shmt1P50431 Gm22582-201ENSMUST00000102283 94 ntBASIC11.24□□□□□ -0.61
Shmt1P50431 Gm23061-201ENSMUST00000102348 116 ntBASIC11.24□□□□□ -0.61
Shmt1P50431 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shmt1P50431 Mir1249-201ENSMUST00000116791 98 ntBASIC11.24□□□□□ -0.61
Shmt1P50431 Gm8482-201ENSMUST00000117972 471 ntBASIC11.24□□□□□ -0.61
Shmt1P50431 Gm15264-201ENSMUST00000118050 502 ntBASIC11.24□□□□□ -0.61
Shmt1P50431 Gm13841-201ENSMUST00000118829 483 ntBASIC11.24□□□□□ -0.61
Shmt1P50431 Gm11449-201ENSMUST00000119175 476 ntBASIC11.24□□□□□ -0.61
Shmt1P50431 Gm13323-201ENSMUST00000120245 1151 ntBASIC11.24□□□□□ -0.61
Shmt1P50431 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.24□□□□□ -0.61
Shmt1P50431 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC11.24□□□□□ -0.61
Shmt1P50431 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC11.24□□□□□ -0.61
Shmt1P50431 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms