Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.83□□□□□ -0.36
LtbrP50284 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LtbrP50284 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.83□□□□□ -0.36
LtbrP50284 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LtbrP50284 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC12.83□□□□□ -0.36
LtbrP50284 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Gm5526-201ENSMUST00000153604 423 ntBASIC12.83□□□□□ -0.36
LtbrP50284 Gm16165-201ENSMUST00000160140 795 ntBASIC12.83□□□□□ -0.36
LtbrP50284 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Gm7714-201ENSMUST00000169154 685 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
LtbrP50284 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
LtbrP50284 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
LtbrP50284 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Gm19927-201ENSMUST00000185792 781 ntBASIC12.83□□□□□ -0.36
LtbrP50284 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC12.83□□□□□ -0.36
LtbrP50284 BB187690-201ENSMUST00000198619 1176 ntBASIC12.83□□□□□ -0.36
LtbrP50284 Gm42964-201ENSMUST00000202965 382 ntBASIC12.83□□□□□ -0.36
LtbrP50284 Gm6794-201ENSMUST00000203829 457 ntBASIC12.83□□□□□ -0.36
LtbrP50284 Gm44605-201ENSMUST00000206892 949 ntBASIC12.83□□□□□ -0.36
LtbrP50284 Gm45258-201ENSMUST00000210042 853 ntBASIC12.83□□□□□ -0.36
LtbrP50284 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 AC124356.1-201ENSMUST00000221469 698 ntBASIC12.83□□□□□ -0.36
LtbrP50284 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.83□□□□□ -0.36
LtbrP50284 AC154527.3-201ENSMUST00000225519 989 ntBASIC12.83□□□□□ -0.36
LtbrP50284 AL589696.1-201ENSMUST00000225711 330 ntBASIC12.83□□□□□ -0.36
LtbrP50284 AC156574.1-201ENSMUST00000227084 452 ntBASIC12.83□□□□□ -0.36
LtbrP50284 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LtbrP50284 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Btrc-209ENSMUST00000224478 2194 ntBASIC12.83□□□□□ -0.36
LtbrP50284 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.83□□□□□ -0.36
LtbrP50284 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
LtbrP50284 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LtbrP50284 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.83□□□□□ -0.36
LtbrP50284 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
LtbrP50284 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LtbrP50284 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Gm14862-201ENSMUST00000115553 870 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Gm9095-201ENSMUST00000117607 881 ntBASIC12.82□□□□□ -0.36
LtbrP50284 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Gm9097-201ENSMUST00000120514 880 ntBASIC12.82□□□□□ -0.36
LtbrP50284 Gm11834-201ENSMUST00000122257 585 ntBASIC12.82□□□□□ -0.36
LtbrP50284 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC12.82□□□□□ -0.36
LtbrP50284 Gm18014-201ENSMUST00000183369 817 ntBASIC12.82□□□□□ -0.36
LtbrP50284 Mir8091-201ENSMUST00000183602 139 ntBASIC12.82□□□□□ -0.36
LtbrP50284 Mir7088-201ENSMUST00000184227 86 ntBASIC12.82□□□□□ -0.36
LtbrP50284 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC12.82□□□□□ -0.36
LtbrP50284 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC12.82□□□□□ -0.36
LtbrP50284 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC12.82□□□□□ -0.36
LtbrP50284 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms