Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC12.66□□□□□ -0.38
Rfx1P48377 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rfx1P48377 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx1P48377 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx1P48377 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx1P48377 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx1P48377 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx1P48377 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx1P48377 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx1P48377 AC160340.2-201ENSMUST00000220812 3675 ntBASIC12.66□□□□□ -0.38
Rfx1P48377 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx1P48377 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx1P48377 CT025639.2-202ENSMUST00000225298 1630 ntBASIC12.66□□□□□ -0.38
Rfx1P48377 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx1P48377 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx1P48377 Gm29101-201ENSMUST00000188329 1471 ntBASIC12.65□□□□□ -0.38
Rfx1P48377 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.65□□□□□ -0.38
Rfx1P48377 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC12.65□□□□□ -0.38
Rfx1P48377 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Gm9220-201ENSMUST00000190721 2544 ntBASIC12.65□□□□□ -0.38
Rfx1P48377 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rfx1P48377 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC12.65□□□□□ -0.38
Rfx1P48377 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Hapln3-203ENSMUST00000206092 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Inpp4a-205ENSMUST00000132401 3234 ntTSL 5 BASIC12.65□□□□□ -0.38
Rfx1P48377 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.65□□□□□ -0.38
Rfx1P48377 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC12.65□□□□□ -0.38
Rfx1P48377 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12.65□□□□□ -0.38
Rfx1P48377 Gm11824-201ENSMUST00000120191 846 ntBASIC12.65□□□□□ -0.38
Rfx1P48377 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Gm23045-201ENSMUST00000175041 96 ntBASIC12.65□□□□□ -0.38
Rfx1P48377 Gm6407-201ENSMUST00000176468 549 ntBASIC12.65□□□□□ -0.38
Rfx1P48377 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.65□□□□□ -0.38
Rfx1P48377 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.65□□□□□ -0.38
Rfx1P48377 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rfx1P48377 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.65□□□□□ -0.38
Rfx1P48377 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.65□□□□□ -0.38
Rfx1P48377 Gm43671-201ENSMUST00000200422 433 ntBASIC12.65□□□□□ -0.38
Rfx1P48377 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rfx1P48377 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.65□□□□□ -0.38
Rfx1P48377 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.65□□□□□ -0.38
Rfx1P48377 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rfx1P48377 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.65□□□□□ -0.38
Rfx1P48377 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.65□□□□□ -0.38
Rfx1P48377 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Gfap-202ENSMUST00000077902 2600 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx1P48377 AC125351.1-201ENSMUST00000221438 2223 ntBASIC12.65□□□□□ -0.38
Rfx1P48377 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.65□□□□□ -0.39
Rfx1P48377 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.64□□□□□ -0.39
Rfx1P48377 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx1P48377 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rfx1P48377 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx1P48377 Gm8320-201ENSMUST00000177584 1762 ntBASIC12.64□□□□□ -0.39
Rfx1P48377 Gm8303-201ENSMUST00000178371 1762 ntBASIC12.64□□□□□ -0.39
Rfx1P48377 Gm8331-201ENSMUST00000178433 1762 ntBASIC12.64□□□□□ -0.39
Rfx1P48377 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx1P48377 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC12.64□□□□□ -0.39
Rfx1P48377 Gm13140-201ENSMUST00000119840 3151 ntBASIC12.64□□□□□ -0.39
Rfx1P48377 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx1P48377 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx1P48377 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx1P48377 Gm7857-201ENSMUST00000117957 358 ntBASIC12.64□□□□□ -0.39
Rfx1P48377 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.64□□□□□ -0.39
Rfx1P48377 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.64□□□□□ -0.39
Rfx1P48377 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.64□□□□□ -0.39
Rfx1P48377 Gm19353-201ENSMUST00000184561 445 ntBASIC12.64□□□□□ -0.39
Rfx1P48377 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.64□□□□□ -0.39
Rfx1P48377 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.64□□□□□ -0.39
Rfx1P48377 Gm37020-201ENSMUST00000195303 992 ntBASIC12.64□□□□□ -0.39
Rfx1P48377 Gm9555-201ENSMUST00000200908 583 ntBASIC12.64□□□□□ -0.39
Rfx1P48377 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rfx1P48377 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC12.64□□□□□ -0.39
Rfx1P48377 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.64□□□□□ -0.39
Rfx1P48377 AC173482.3-201ENSMUST00000225492 1212 ntBASIC12.64□□□□□ -0.39
Rfx1P48377 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx1P48377 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx1P48377 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx1P48377 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx1P48377 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx1P48377 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx1P48377 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Rfx1P48377 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx1P48377 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.64□□□□□ -0.39
Rfx1P48377 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.64□□□□□ -0.39
Rfx1P48377 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx1P48377 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms