Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cd9P40240 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cd9P40240 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Cd9P40240 Gm14231-201ENSMUST00000120090 592 ntBASIC10.49□□□□□ -0.73
Cd9P40240 Gm11988-201ENSMUST00000122321 1069 ntBASIC10.49□□□□□ -0.73
Cd9P40240 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cd9P40240 Gm44545-201ENSMUST00000208262 746 ntBASIC10.49□□□□□ -0.73
Cd9P40240 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.49□□□□□ -0.73
Cd9P40240 AC157650.1-201ENSMUST00000224582 610 ntBASIC10.49□□□□□ -0.73
Cd9P40240 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.49□□□□□ -0.73
Cd9P40240 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Cd9P40240 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.49□□□□□ -0.73
Cd9P40240 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cd9P40240 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cd9P40240 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cd9P40240 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cd9P40240 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cd9P40240 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cd9P40240 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cd9P40240 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cd9P40240 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cd9P40240 AC126459.1-201ENSMUST00000214791 2123 ntBASIC10.49□□□□□ -0.73
Cd9P40240 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cd9P40240 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cd9P40240 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.49□□□□□ -0.73
Cd9P40240 Gm13498-201ENSMUST00000119159 2166 ntBASIC10.49□□□□□ -0.73
Cd9P40240 Gm7061-201ENSMUST00000118127 1416 ntBASIC10.49□□□□□ -0.73
Cd9P40240 Lrtm1-203ENSMUST00000224760 3060 ntBASIC10.49□□□□□ -0.73
Cd9P40240 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cd9P40240 Gm44445-201ENSMUST00000204075 2683 ntBASIC10.49□□□□□ -0.73
Cd9P40240 Gm37567-201ENSMUST00000193241 2279 ntBASIC10.49□□□□□ -0.73
Cd9P40240 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cd9P40240 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cd9P40240 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cd9P40240 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cd9P40240 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cd9P40240 AC154186.1-201ENSMUST00000227711 1597 ntBASIC10.48□□□□□ -0.73
Cd9P40240 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cd9P40240 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cd9P40240 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cd9P40240 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cd9P40240 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cd9P40240 Gm21115-201ENSMUST00000187565 2578 ntBASIC10.48□□□□□ -0.73
Cd9P40240 Cdh18-207ENSMUST00000226693 2165 ntBASIC10.48□□□□□ -0.73
Cd9P40240 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC10.48□□□□□ -0.73
Cd9P40240 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cd9P40240 Gm38111-201ENSMUST00000194817 2741 ntBASIC10.48□□□□□ -0.73
Cd9P40240 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cd9P40240 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cd9P40240 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cd9P40240 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Cd9P40240 Gm11560-201ENSMUST00000117567 948 ntBASIC10.48□□□□□ -0.73
Cd9P40240 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.48□□□□□ -0.73
Cd9P40240 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
Cd9P40240 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cd9P40240 Gm17221-201ENSMUST00000163909 481 ntBASIC10.48□□□□□ -0.73
Cd9P40240 Gm17073-201ENSMUST00000168069 556 ntBASIC10.48□□□□□ -0.73
Cd9P40240 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Cd9P40240 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.48□□□□□ -0.73
Cd9P40240 Gm37141-201ENSMUST00000191938 422 ntBASIC10.48□□□□□ -0.73
Cd9P40240 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cd9P40240 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Cd9P40240 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.48□□□□□ -0.73
Cd9P40240 Gm45120-201ENSMUST00000208880 408 ntBASIC10.48□□□□□ -0.73
Cd9P40240 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.48□□□□□ -0.73
Cd9P40240 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cd9P40240 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cd9P40240 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cd9P40240 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cd9P40240 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cd9P40240 Gm4454-201ENSMUST00000190585 2578 ntBASIC10.48□□□□□ -0.73
Cd9P40240 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cd9P40240 Lnpk-201ENSMUST00000064503 3195 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cd9P40240 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cd9P40240 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Cd9P40240 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cd9P40240 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cd9P40240 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cd9P40240 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cd9P40240 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cd9P40240 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cd9P40240 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cd9P40240 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cd9P40240 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cd9P40240 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cd9P40240 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cd9P40240 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cd9P40240 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Cd9P40240 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cd9P40240 Gm43737-201ENSMUST00000199915 2740 ntBASIC10.47□□□□□ -0.73
Cd9P40240 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cd9P40240 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cd9P40240 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cd9P40240 Gm12745-201ENSMUST00000121767 214 ntBASIC10.47□□□□□ -0.73
Cd9P40240 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.47□□□□□ -0.73
Cd9P40240 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cd9P40240 Ap1g1-206ENSMUST00000179104 1096 ntBASIC10.47□□□□□ -0.73
Cd9P40240 Gm29155-201ENSMUST00000185910 269 ntBASIC10.47□□□□□ -0.73
Cd9P40240 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.47□□□□□ -0.73
Cd9P40240 Gm42803-201ENSMUST00000201051 451 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms