Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm11824-201ENSMUST00000120191 846 ntBASIC12.2□□□□□ -0.46
Vcam1P29533 Gm13505-201ENSMUST00000121666 817 ntBASIC12.2□□□□□ -0.46
Vcam1P29533 Gm6939-201ENSMUST00000122029 864 ntBASIC12.2□□□□□ -0.46
Vcam1P29533 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC12.2□□□□□ -0.46
Vcam1P29533 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vcam1P29533 Gm16228-201ENSMUST00000162286 809 ntBASIC12.2□□□□□ -0.46
Vcam1P29533 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC12.2□□□□□ -0.46
Vcam1P29533 Gm37232-201ENSMUST00000194887 367 ntBASIC12.2□□□□□ -0.46
Vcam1P29533 AC242269.1-201ENSMUST00000227020 741 ntBASIC12.2□□□□□ -0.46
Vcam1P29533 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Vcam1P29533 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vcam1P29533 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vcam1P29533 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
Vcam1P29533 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vcam1P29533 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vcam1P29533 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vcam1P29533 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.2□□□□□ -0.46
Vcam1P29533 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.2□□□□□ -0.46
Vcam1P29533 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vcam1P29533 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Gm8848-201ENSMUST00000197270 1343 ntBASIC12.19□□□□□ -0.46
Vcam1P29533 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Vcam1P29533 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Vcam1P29533 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC12.19□□□□□ -0.46
Vcam1P29533 Gm11929-201ENSMUST00000118175 945 ntBASIC12.19□□□□□ -0.46
Vcam1P29533 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Gm14699-201ENSMUST00000122340 228 ntBASIC12.19□□□□□ -0.46
Vcam1P29533 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC12.19□□□□□ -0.46
Vcam1P29533 Gm38233-201ENSMUST00000194259 807 ntBASIC12.19□□□□□ -0.46
Vcam1P29533 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC12.19□□□□□ -0.46
Vcam1P29533 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Gm6008-201ENSMUST00000206542 874 ntBASIC12.19□□□□□ -0.46
Vcam1P29533 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC12.19□□□□□ -0.46
Vcam1P29533 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Gm7052-201ENSMUST00000167568 1512 ntBASIC12.19□□□□□ -0.46
Vcam1P29533 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vcam1P29533 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC12.19□□□□□ -0.46
Vcam1P29533 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Vcam1P29533 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vcam1P29533 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vcam1P29533 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Vcam1P29533 Gm37242-201ENSMUST00000191873 2085 ntBASIC12.18□□□□□ -0.46
Vcam1P29533 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vcam1P29533 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC12.18□□□□□ -0.46
Vcam1P29533 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Vcam1P29533 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Mir598-201ENSMUST00000102094 79 ntBASIC12.18□□□□□ -0.46
Vcam1P29533 Gm23132-201ENSMUST00000104254 132 ntBASIC12.18□□□□□ -0.46
Vcam1P29533 Gm11771-201ENSMUST00000118124 732 ntBASIC12.18□□□□□ -0.46
Vcam1P29533 Gm13777-201ENSMUST00000118208 345 ntBASIC12.18□□□□□ -0.46
Vcam1P29533 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC12.18□□□□□ -0.46
Vcam1P29533 Gm23999-201ENSMUST00000158057 104 ntBASIC12.18□□□□□ -0.46
Vcam1P29533 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Gm17107-201ENSMUST00000170983 553 ntBASIC12.18□□□□□ -0.46
Vcam1P29533 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC12.18□□□□□ -0.46
Vcam1P29533 Gm43106-201ENSMUST00000199485 637 ntBASIC12.18□□□□□ -0.46
Vcam1P29533 Gm8083-201ENSMUST00000203976 475 ntBASIC12.18□□□□□ -0.46
Vcam1P29533 Gm44917-201ENSMUST00000208798 520 ntBASIC12.18□□□□□ -0.46
Vcam1P29533 CU025215.1-201ENSMUST00000222986 603 ntBASIC12.18□□□□□ -0.46
Vcam1P29533 AC187103.3-201ENSMUST00000225725 646 ntBASIC12.18□□□□□ -0.46
Vcam1P29533 AC163646.3-202ENSMUST00000228685 691 ntBASIC12.18□□□□□ -0.46
Vcam1P29533 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vcam1P29533 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC12.18□□□□□ -0.46
Vcam1P29533 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Vcam1P29533 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vcam1P29533 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms