Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 AC130823.1-201ENSMUST00000228929 1549 ntBASIC9.45□□□□□ -0.9
P20040 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
P20040 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.45□□□□□ -0.9
P20040 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC9.45□□□□□ -0.9
P20040 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P20040 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC9.44□□□□□ -0.9
P20040 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Cdh18-207ENSMUST00000226693 2165 ntBASIC9.44□□□□□ -0.9
P20040 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P20040 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.44□□□□□ -0.9
P20040 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P20040 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P20040 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Gm12795-201ENSMUST00000117594 539 ntBASIC9.44□□□□□ -0.9
P20040 Gm9133-201ENSMUST00000118289 540 ntBASIC9.44□□□□□ -0.9
P20040 Gm14270-201ENSMUST00000118388 846 ntBASIC9.44□□□□□ -0.9
P20040 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.44□□□□□ -0.9
P20040 Gm25554-201ENSMUST00000158075 113 ntBASIC9.44□□□□□ -0.9
P20040 Gm8194-201ENSMUST00000159783 859 ntBASIC9.44□□□□□ -0.9
P20040 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC9.44□□□□□ -0.9
P20040 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
P20040 Gm7985-201ENSMUST00000183329 981 ntBASIC9.44□□□□□ -0.9
P20040 Gm38210-201ENSMUST00000191944 809 ntBASIC9.44□□□□□ -0.9
P20040 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P20040 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC9.44□□□□□ -0.9
P20040 Gm9139-201ENSMUST00000218817 700 ntBASIC9.44□□□□□ -0.9
P20040 AC140293.1-201ENSMUST00000225626 1247 ntBASIC9.44□□□□□ -0.9
P20040 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC9.44□□□□□ -0.9
P20040 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.44□□□□□ -0.9
P20040 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.44□□□□□ -0.9
P20040 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P20040 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.44□□□□□ -0.9
P20040 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P20040 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P20040 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Gm16478-201ENSMUST00000208113 5084 ntBASIC9.43□□□□□ -0.9
P20040 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.43□□□□□ -0.9
P20040 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC9.43□□□□□ -0.9
P20040 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
P20040 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
P20040 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Gm18294-201ENSMUST00000176980 1748 ntBASIC9.43□□□□□ -0.9
P20040 Gm44062-201ENSMUST00000203312 4857 ntBASIC9.43□□□□□ -0.9
P20040 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
P20040 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
P20040 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Snord17-201ENSMUST00000104526 238 ntBASIC9.43□□□□□ -0.9
P20040 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.43□□□□□ -0.9
P20040 Gm14807-201ENSMUST00000116640 983 ntBASIC9.43□□□□□ -0.9
P20040 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC9.43□□□□□ -0.9
P20040 Gm13284-201ENSMUST00000121020 547 ntBASIC9.43□□□□□ -0.9
P20040 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC9.43□□□□□ -0.9
P20040 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P20040 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC9.43□□□□□ -0.9
P20040 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 134.1 ms