Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Itgb3O54890 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.29□□□□□ -0.6
Itgb3O54890 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.29□□□□□ -0.6
Itgb3O54890 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.29□□□□□ -0.6
Itgb3O54890 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.29□□□□□ -0.6
Itgb3O54890 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.29□□□□□ -0.6
Itgb3O54890 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.29□□□□□ -0.6
Itgb3O54890 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Itgb3O54890 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.28□□□□□ -0.6
Itgb3O54890 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Itgb3O54890 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.28□□□□□ -0.6
Itgb3O54890 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Itgb3O54890 Gm5472-201ENSMUST00000178604 1678 ntBASIC11.28□□□□□ -0.6
Itgb3O54890 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC11.28□□□□□ -0.6
Itgb3O54890 Gm7539-201ENSMUST00000189789 630 ntBASIC11.28□□□□□ -0.6
Itgb3O54890 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Gm6794-201ENSMUST00000203829 457 ntBASIC11.28□□□□□ -0.6
Itgb3O54890 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Gm29763-201ENSMUST00000205306 616 ntBASIC11.28□□□□□ -0.6
Itgb3O54890 AC154585.1-201ENSMUST00000218917 997 ntBASIC11.28□□□□□ -0.6
Itgb3O54890 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC11.28□□□□□ -0.6
Itgb3O54890 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.28□□□□□ -0.6
Itgb3O54890 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Itgb3O54890 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Itgb3O54890 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.28□□□□□ -0.6
Itgb3O54890 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.28□□□□□ -0.6
Itgb3O54890 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.28□□□□□ -0.6
Itgb3O54890 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.28□□□□□ -0.6
Itgb3O54890 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Itgb3O54890 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Itgb3O54890 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.27□□□□□ -0.6
Itgb3O54890 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Itgb3O54890 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Itgb3O54890 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Itgb3O54890 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Itgb3O54890 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Itgb3O54890 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Itgb3O54890 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Itgb3O54890 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.27□□□□□ -0.61
Itgb3O54890 Mir1249-201ENSMUST00000116791 98 ntBASIC11.27□□□□□ -0.61
Itgb3O54890 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
Itgb3O54890 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Itgb3O54890 Gm4812-201ENSMUST00000182847 993 ntBASIC11.27□□□□□ -0.61
Itgb3O54890 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC11.27□□□□□ -0.61
Itgb3O54890 Gm7593-201ENSMUST00000187246 644 ntBASIC11.27□□□□□ -0.61
Itgb3O54890 Gm29543-201ENSMUST00000188138 967 ntBASIC11.27□□□□□ -0.61
Itgb3O54890 Gm6606-201ENSMUST00000193613 947 ntBASIC11.27□□□□□ -0.61
Itgb3O54890 Gm4430-202ENSMUST00000193902 1041 ntBASIC11.27□□□□□ -0.61
Itgb3O54890 Gm43244-201ENSMUST00000196994 1285 ntBASIC11.27□□□□□ -0.61
Itgb3O54890 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Gm7319-201ENSMUST00000210047 778 ntBASIC11.27□□□□□ -0.61
Itgb3O54890 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Itgb3O54890 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms