Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm43066-201ENSMUST00000199589 1260 ntBASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 AC156016.4-201ENSMUST00000227470 647 ntBASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 AC147366.2-201ENSMUST00000226859 2038 ntBASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Mir3100-201ENSMUST00000174918 65 ntBASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Gm36980-201ENSMUST00000195643 622 ntBASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 AC154433.1-201ENSMUST00000224401 1183 ntBASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Tbce-201ENSMUST00000039894 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Gm7190-201ENSMUST00000118669 1452 ntBASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Tph1-202ENSMUST00000107669 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc180J3QNE4 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Tmem29-201ENSMUST00000059256 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Gm15661-201ENSMUST00000117390 556 ntBASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Gm12047-201ENSMUST00000117561 944 ntBASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Gm12733-201ENSMUST00000119871 767 ntBASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Gm17147-201ENSMUST00000164176 432 ntBASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Gm8960-201ENSMUST00000219787 788 ntBASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc180J3QNE4 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Gm25561-201ENSMUST00000104607 125 ntBASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Gm14111-201ENSMUST00000119851 999 ntBASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Gm3752-202ENSMUST00000167833 450 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Gm10128-201ENSMUST00000171360 615 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Gm2956-202ENSMUST00000178722 450 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Gm10340-202ENSMUST00000188235 615 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Gm37486-201ENSMUST00000195663 405 ntBASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Sox2ot-211ENSMUST00000197977 2970 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 AC157650.1-201ENSMUST00000224582 610 ntBASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Gm5507-201ENSMUST00000091897 1008 ntBASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Gm8055-201ENSMUST00000099956 1008 ntBASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Gm3283-201ENSMUST00000199319 1350 ntBASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Gm23061-201ENSMUST00000102348 116 ntBASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Gm11824-201ENSMUST00000120191 846 ntBASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Gm28653-202ENSMUST00000227082 521 ntBASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc180J3QNE4 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
Ccdc180J3QNE4 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms