Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Saa-ps-201ENSMUST00000211148 320 ntBASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Gm8181-201ENSMUST00000062242 669 ntBASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Gm3372-201ENSMUST00000198806 1792 ntBASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Gm13981-201ENSMUST00000122360 447 ntBASIC8.92□□□□□ -0.98
Usf3B2RUQ2 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Gm25569-201ENSMUST00000157175 131 ntBASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Gm9162-201ENSMUST00000182081 991 ntBASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Gm4753-201ENSMUST00000188327 1255 ntBASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Gm29067-201ENSMUST00000190821 470 ntBASIC8.92□□□□□ -0.98
Usf3B2RUQ2 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 CT025618.1-203ENSMUST00000227008 589 ntBASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 AC108416.1-201ENSMUST00000228755 1558 ntBASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usf3B2RUQ2 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 AC022682.1-201ENSMUST00000224624 2023 ntBASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Gm12986-201ENSMUST00000119037 967 ntBASIC8.91□□□□□ -0.98
Usf3B2RUQ2 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Gm17944-201ENSMUST00000186351 643 ntBASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usf3B2RUQ2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms