Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm12619-201ENSMUST00000117369 385 ntBASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gstm1-202ENSMUST00000126593 828 ntTSL 3 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm5960-201ENSMUST00000188483 406 ntBASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Cyp2e1-203ENSMUST00000210235 1012 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm42067-202ENSMUST00000210917 410 ntTSL 2 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 AC124400.2-201ENSMUST00000224939 253 ntBASIC10.73□□□□□ -0.69
Col4a6B1AVK5 AC164978.2-201ENSMUST00000226645 857 ntBASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm45501-201ENSMUST00000211468 2526 ntBASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm5092-201ENSMUST00000188185 1675 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 BC051665-201ENSMUST00000026078 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Tead4-203ENSMUST00000130454 1718 ntTSL 5 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm15353-201ENSMUST00000110860 702 ntTSL 5 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm12168-201ENSMUST00000119051 368 ntBASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm14524-201ENSMUST00000121066 683 ntBASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm13543-201ENSMUST00000121230 796 ntBASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm12696-201ENSMUST00000122361 905 ntBASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Plut-201ENSMUST00000172461 855 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm9866-201ENSMUST00000177636 486 ntTSL 5 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Igkv4-54-201ENSMUST00000177697 288 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm32102-201ENSMUST00000196885 241 ntBASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 AC107851.1-201ENSMUST00000215982 417 ntTSL 2 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Olfr1511-202ENSMUST00000214168 1468 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col4a6B1AVK5 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Mettl8-204ENSMUST00000112186 2347 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Gm14239-201ENSMUST00000116491 685 ntBASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Gm13975-201ENSMUST00000119253 782 ntBASIC10.72□□□□□ -0.69
Col4a6B1AVK5 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Rbm4-201ENSMUST00000164209 801 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Gm38301-201ENSMUST00000195573 543 ntBASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Gm9771-201ENSMUST00000198267 1137 ntBASIC10.72□□□□□ -0.69
Col4a6B1AVK5 AC157931.1-201ENSMUST00000198565 346 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Gm18165-201ENSMUST00000217426 928 ntBASIC10.72□□□□□ -0.69
Col4a6B1AVK5 AC120406.1-201ENSMUST00000220362 482 ntBASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Gm18783-201ENSMUST00000220465 1151 ntBASIC10.72□□□□□ -0.69
Col4a6B1AVK5 CT025538.1-201ENSMUST00000223638 369 ntBASIC10.72□□□□□ -0.69
Col4a6B1AVK5 AC140393.4-201ENSMUST00000226994 765 ntBASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col4a6B1AVK5 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col4a6B1AVK5 Actl9-201ENSMUST00000174088 1373 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms