Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Gm12663-201ENSMUST00000118481 958 ntBASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Gm14234-201ENSMUST00000119539 845 ntBASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Gm5700-201ENSMUST00000191483 989 ntBASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Gm2594-201ENSMUST00000214774 742 ntBASIC11.95□□□□□ -0.5
Smc1aQ9CU62 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smc1aQ9CU62 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Gm15374-201ENSMUST00000119313 844 ntBASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Mir1896-201ENSMUST00000122641 81 ntBASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Gm24992-201ENSMUST00000157412 130 ntBASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.94□□□□□ -0.5
Smc1aQ9CU62 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Mir6941-201ENSMUST00000184711 59 ntBASIC11.94□□□□□ -0.5
Smc1aQ9CU62 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Gm37365-201ENSMUST00000193109 409 ntBASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Gm44323-201ENSMUST00000198689 129 ntBASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Gm5599-201ENSMUST00000209602 788 ntBASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smc1aQ9CU62 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smc1aQ9CU62 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smc1aQ9CU62 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smc1aQ9CU62 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smc1aQ9CU62 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smc1aQ9CU62 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smc1aQ9CU62 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smc1aQ9CU62 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smc1aQ9CU62 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smc1aQ9CU62 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Smc1aQ9CU62 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC11.93□□□□□ -0.5
Smc1aQ9CU62 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms