Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 4933406K04Rik-201ENSMUST00000124068 1136 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 3300005D01Rik-204ENSMUST00000181484 1174 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gm32591-201ENSMUST00000203038 414 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 AC155929.2-201ENSMUST00000218541 307 ntBASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Rpl19-ps2-201ENSMUST00000219540 590 ntBASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Ssr3-202ENSMUST00000119896 1469 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 2900011O08Rik-201ENSMUST00000056521 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Snap25-201ENSMUST00000028727 2116 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 6330415B21Rik-201ENSMUST00000204215 2200 ntBASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Ighv6-3-201ENSMUST00000103486 356 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Ighv6-6-201ENSMUST00000103489 357 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gm12168-201ENSMUST00000119051 368 ntBASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gm12376-201ENSMUST00000120538 607 ntBASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gm14250-201ENSMUST00000148458 566 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gm8425-201ENSMUST00000171395 769 ntBASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gm38321-201ENSMUST00000195053 235 ntBASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 AC157931.1-201ENSMUST00000198565 346 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gm5043-201ENSMUST00000202103 820 ntBASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gm34358-201ENSMUST00000204585 665 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gm18129-201ENSMUST00000208834 1044 ntBASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 AC154264.2-201ENSMUST00000216569 403 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 AC105950.2-201ENSMUST00000220938 368 ntBASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 AC102523.2-201ENSMUST00000227813 983 ntBASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gm4953-201ENSMUST00000077309 483 ntBASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh15Q99PJ1 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh15Q99PJ1 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC11.77□□□□□ -0.52
Pcdh15Q99PJ1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh15Q99PJ1 Gm17026-201ENSMUST00000166674 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh15Q99PJ1 Gm17124-201ENSMUST00000168320 1379 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pcdh15Q99PJ1 Gm42879-201ENSMUST00000198656 2214 ntBASIC11.77□□□□□ -0.52
Pcdh15Q99PJ1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh15Q99PJ1 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh15Q99PJ1 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh15Q99PJ1 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh15Q99PJ1 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh15Q99PJ1 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.77□□□□□ -0.52
Pcdh15Q99PJ1 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Gm15604-201ENSMUST00000118350 1456 ntBASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Gstm1-202ENSMUST00000126593 828 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Gm9458-201ENSMUST00000135273 727 ntBASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Gm13855-201ENSMUST00000145644 744 ntTSL 2 BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Gm8091-201ENSMUST00000150506 886 ntBASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Gm42871-201ENSMUST00000199333 315 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Gm29725-201ENSMUST00000206614 407 ntBASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 AC167234.1-201ENSMUST00000219929 279 ntBASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Gm43305-202ENSMUST00000225083 705 ntBASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Gm43585-201ENSMUST00000199375 1403 ntBASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Zfp819-202ENSMUST00000116324 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Nr1h4-202ENSMUST00000105296 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Gm42587-201ENSMUST00000198462 1981 ntBASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Gm32849-201ENSMUST00000208696 1798 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Sult6b2-201ENSMUST00000111768 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh15Q99PJ1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh15Q99PJ1 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh15Q99PJ1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdh15Q99PJ1 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh15Q99PJ1 Gzmb-201ENSMUST00000015581 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh15Q99PJ1 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh15Q99PJ1 Sectm1a-202ENSMUST00000100126 680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh15Q99PJ1 Scgb1b30-201ENSMUST00000108083 491 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh15Q99PJ1 Rhox12-202ENSMUST00000115146 561 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms