Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Gm12254-201ENSMUST00000134617 471 ntBASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Mir3091-201ENSMUST00000175086 76 ntBASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 AC107711.3-201ENSMUST00000228939 1035 ntBASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx6-1Q99MA9 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm14542-201ENSMUST00000118460 1248 ntBASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm14231-201ENSMUST00000120090 592 ntBASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm6276-201ENSMUST00000120159 579 ntBASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm38188-201ENSMUST00000192879 856 ntBASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm37944-201ENSMUST00000194233 414 ntBASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm8828-201ENSMUST00000196786 1290 ntBASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm43002-201ENSMUST00000200310 155 ntBASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 AC134860.2-201ENSMUST00000225277 1036 ntBASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 AC154806.7-201ENSMUST00000227998 202 ntBASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm23458-201ENSMUST00000083257 169 ntBASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms