Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc17Q8CE13 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Ccdc17Q8CE13 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ccdc17Q8CE13 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc17Q8CE13 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc17Q8CE13 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ccdc17Q8CE13 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.18□□□□□ -0.62
Ccdc17Q8CE13 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc17Q8CE13 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC11.18□□□□□ -0.62
Ccdc17Q8CE13 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Gm13286-201ENSMUST00000117750 537 ntBASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Gm24943-201ENSMUST00000158329 433 ntBASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Gm6291-201ENSMUST00000179994 309 ntBASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Gm7928-201ENSMUST00000181249 701 ntBASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Gm27444-201ENSMUST00000184157 137 ntBASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 n-R5s71-201ENSMUST00000093668 119 ntBASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Gm21039-201ENSMUST00000223359 2012 ntBASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc17Q8CE13 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Gm13171-201ENSMUST00000117233 391 ntBASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Gm16209-201ENSMUST00000118457 627 ntBASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Gm15815-201ENSMUST00000120569 255 ntBASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Gm25288-201ENSMUST00000122800 265 ntBASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Gm10171-201ENSMUST00000126220 628 ntBASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Gm29808-201ENSMUST00000194419 468 ntBASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Nsmce2-203ENSMUST00000227173 1122 ntBASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Gm10233-201ENSMUST00000089275 628 ntBASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.16□□□□□ -0.62
Ccdc17Q8CE13 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc17Q8CE13 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms